12 projects
pydra-dcm2niix
Provides a task interface for the popular dcm2niix DICOM to NIfTI converter
medimages4tests
Generates dummy medical image data with realistic headers to be used in image handling tests
xnat4tests
Creates basic XNAT instance for API tests
dds4xnat
Renames the scan type for MR sessions stored on XNAT using the DeepDicomSort algorithm
xnat
An XNAT client that exposes the XNAT REST interface as python objects. Part of the interface is automatically generated based on the servers data model as defined by the xnat schema.
xnatutils
A collection of scripts for downloading/uploading and listing data from XNAT repositories.
arcana
Abstracted repository-centric analysis framework
banana
Brain imAgiNg Analysis iN Arcana (Banana): brain imaging analysis workflows implemented in the Arcana framework (arcana.readthedocs.io)
nineml
A tool for reading, writing and generally working with 9ML objects and files.
ninemlcatalog
A collection of 9ML models and basic Python functions for accessing them
pype9
PYthon PipelinEs for 9ML (Pype9) is a collection of Python pipelines for simulating networks of neuron models described in 9ML with various simulator backends.
Diophantine
A python package for finding small solutions of systems of diophantine (integer algebra) equations