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Matthew McCormick

Username    thewtex
Date joined   Joined

75 projects

itk-segmentation

Last released

ITK is an open-source toolkit for multidimensional image analysis

itk-registration

Last released

ITK is an open-source toolkit for multidimensional image analysis

itk-numerics

Last released

ITK is an open-source toolkit for multidimensional image analysis

itk-io

Last released

ITK is an open-source toolkit for multidimensional image analysis

itk-filtering

Last released

ITK is an open-source toolkit for multidimensional image analysis

itk-core

Last released

ITK is an open-source toolkit for multidimensional image analysis

itk

Last released

ITK is an open-source toolkit for multidimensional image analysis

tensorboard-plugin-3d

Last released

TensorBoard plugin 3D.

cmake

Last released

CMake is an open-source, cross-platform family of tools designed to build, test and package software

itk-vkfft

Last released

VkFFT backends for ITK FFT classes.

itk-tubetk

Last released

An open-source toolkit, led by Kitware, Inc., for the segmentation, registration, and analysis of tubes and surfaces in images.

itk-pocus

Last released

ITKPOCUS - an open source library for image processing and AI of point-of-care ultrasound, based on ITK (https://pypi.org/project/itk/)

itk-strain

Last released

ITK filters to estimate a strain tensor field from a displacement field or a spatial transformation

itk-ultrasound

Last released

Filters for use with the Insight Toolkit (ITK) that may be particularly useful for the reconstruction and analysis of ultrasound images.

itk-boneenhancement

Last released

Various filters for enhancing cortical bones in quantitative computed tomography.

spatial_image_ngff

Last released

spatial-image-ngff

spatial_image_multiscale

Last released

spatial-image-multiscale

spatial_image

Last released

spatial-image

itk-growcut

Last released

Segments a 3D image from foreground and background seeds.

scikit-build

Last released

Improved build system generator for Python C/C++/Fortran/Cython extensions

itk-morphologicalcontourinterpolation

Last released

Image morphological contour interpolation.

itk-elastix-opencl

Last released

Provides an ITK Python interface to elastix, a toolbox for rigid and nonrigid registration of images

itk-elastix

Last released

Provides an ITK Python interface to elastix, a toolbox for rigid and nonrigid registration of images

itk-isotropicwavelets

Last released

Steerable Wavelet Pyramid with Isotropic Wavelets and Riesz Functions

itk-iofdf

Last released

ITK `ImageIO` class to read or write the FDF image format

itk-texturefeatures

Last released

An ITK module to compute N-dimension grayscale texture feature images

itk-thickness3d

Last released

An ITK module to compute 3D thickness

itk-totalvariation

Last released

TotalVariation algorithms, providing a wrap for the external project: https://github.com/albarji/proxTV

itk-anisotropicdiffusionlbr

Last released

Smooth images while preserving edges or coherent structures.

pygccxml

Last released

Python package for easy C++ declarations navigation.

itk-hasi

Last released

High-throughput Applications for Skeletal Imaging

hasi

Last released

High-throughput Applications for Skeletal Imaging (HASI) Python content

itk-shape

Last released

A C++ implementation of Procrustes alignment for 3D meshes.

itk-bonemorphometry

Last released

An ITK module to compute bone morphometry features and feature maps

itk-skullstripping

Last released

Automatic skull-stripping for neuroimage analysis

itk-bsplinegradient

Last released

Approximate an image's gradient from a B-spline fit to its intensity.

itk-higherorderaccurategradient

Last released

ITK filters to estimate higher order accurate derivative and gradients

itk-splitcomponents

Last released

ITK filters to split a multi-component pixel image into component-wise scalar images

itkwidgets

Last released

Interactive Jupyter widgets to visualize images, point sets, and meshes in 2D and 3D

itk-meshtopolydata

Last released

Convert an ITK Mesh to a simple data structure compatible with vtkPolyData.

itk-minimalpathextraction

Last released

A minimal path extraction framework based on Fast Marching arrival functions.

napari-itk-io

Last released

File IO with itk for napari

itk_napari_conversion

Last released

Convert between itk and napari data structures.

itk-cuberille

Last released

This module implements cuberille implicit surface polygonization for ITK.

itk-montage

Last released

Montaging for microscopy imaging files.

itk-ioscanco

Last released

An ITK module to read and write Scanco microCT .isq files.

itk-ndreg

Last released

This is the Neurodata open-source Python package that performs affine and deformable (LDDMM) image registration.

itk-cleaver

Last released

An ITK interface to the Cleaver multi-material tetrahedral meshing library

simtk

Last released

sim: structured illumination microscopy

itk-smoothingrecursiveyvvgaussianfilter

Last released

Young & Van Vliet recursive Gaussian smoothing filter for GPU (OpenCL) and CPU

itk-phasesymmetry

Last released

ITK classes for computing phase symmetry using multi-scale steerable filters

itk-polartransform

Last released

This module contains ITK classes to transform from cartesian to polar coordinate systems and back.

itk-principalcomponentsanalysis

Last released

ITK classes for the analysis of the principal components of data sets, optionally point data associated with the vertices of a mesh.

itk-labelerodedilate

Last released

An ITK module for erode and dilate operations on label images

itk-fixedpointinversedisplacementfield

Last released

Takes a displacement field as input and computes the displacement field that is its inverse.

itk-simpleitkfilters

Last released

This module contains a collension of ITK Filters used by SimpleITK. These filter are usefull to SimpleITK in that they may wrap existing ITK filters with an interface expected by SimpleITK, or may add important basic filters needed for completeness.

itk-iomgh

Last released

An ITK module to support input and output of the MGH file format.

ccfwidget

Last released

A Jupyter widget for the Allen Common Coordinate Framework (CCF) Mouse Brain Atlas.

itk-meshnoise

Last released

Classes to perturb mesh objects with Gaussian noise

itk-ringartifact

Last released

ITK filters to reduce stripe artifacts or ring artifacts common in x-ray computed tomography, focused ion beam images, etc.

itk-genericlabelinterpolator

Last released

ITK classes for generic interpolation of label images.

itk-twoprojectionregistration

Last released

ITK classes for two-projection 2D/3D registration

itk-parabolicmorphology

Last released

ITK classes for mathematical morphology using parabolic structuring functions

itk-subdivisionquadedgemeshfilter

Last released

ITK classes for triangle mesh subdivision

itk-iomeshstl

Last released

MeshIO class to read and write ITK meshes into STL files.

itk-gpusmoothing

Last released

Common smoothing filters accelerated with OpenCL.

itk-gpuimagefilterbase

Last released

Base classes for ITK image filters accelerated with OpenCL.

itk-gpufinitedifference

Last released

Base classes for ITK finite difference filters accelerated with OpenCL.

itk-gpucommon

Last released

Core classes for ITK filters accelerated with OpenCL.

itk-vtkglue

Last released

This module contains classes that bridge and ITK and VTK image processing and visualization pipeline.

scikit-ci

Last released

scikit-ci enables a centralized and simpler CI configuration for Python extensions.

scikit-ci-addons

Last released

scikit-ci-addons is a command line tool and a set of scripts useful to help drive the CI of projects leveraging services like Appveyor, CircleCI, or TravisCI.

jinja2-github

Last released

Jinja2 Extension for rendering GitHub project properties

itk-krcahsheetness

Last released

ITK filters to generate a sheetness feature image useful for segmenting bone in CT images and similar applications.

sphinx-foundation-theme

Last released

A Sphinx HTML theme that uses Zurb foundation-sites.

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