39 projects
dservercore
Web API to register/lookup/search for dtool dataset metadata
dtool-http
Add HTTP read only dataset support to dtool
dtoolcore
Core API for managing (scientific) data
dserver-retrieve-plugin-mongo
Retrieve plugin for dserver using mongodb
dserver-search-plugin-mongo
Search plugin for dserver using mongodb
dtool
dtool command line client for managing data
dserver-minimal
Meta-package for installing a minimal working dserver consisting of dservercore, dserver-search-plugin-mongo, and dserver-retrieve-plugin-mongo
dtool-lookup-server-retrieve-plugin-mongo
Retrieve plugin for dtool-lookup-server using mongodb
dtool-lookup-server-search-plugin-mongo
Search plugin for dtool-lookup-server using mongodb
dtool-lookup-server
Web API to register/lookup/search for dtool dataset metadata
dtool-s3
Add S3 support to dtool
dtool-config
Plugin to make configuration of dtool easier
dtool-cli
Data management command line tool: dtool.
dtool-info
Dtool plugin for getting information about datasets
dtool-symlink
Create dataset where data directory is a symlink
dtool-overlay
dtool CLI utilities for working with per item metadata
dtool-create
Dtool plugin for creating datasets
dtool-annotation
Add ability to annotate datasets using the dtool CLI
dtool-tag
Add ability to tag datasets using the dtool CLI
dtool-lookup-server-annotation-filter-plugin
Extend dtool-lookup-server with ability to filter by annotations
dtool-gui-tk
Graphical user interface for managing data using dtool
dtool-irods
Add iRODS support to dtool
dtool-ecs
Add ECS S3 support to dtool
dmaudit
dmaudit generates data management audit reports
dtool_lookup_client
Dtool plugin for interacting with dtool lookup server
jobarchitect
Tools for batching jobs and dealing with file paths
dserve
Tool to serve a dataset over HTTP
dtoolutils
Utilities for working with dtoolcore
arctool
arctool is a tool for archiving data
jicbioimage.transform
Python package wrapping commonly used image transformations.
jicbioimage.illustrate
Python package providing a set of tools for creating annotated images and illustrations.
jicbioimage.core
Python package designed to make it easy to work with bio images.
jicparameters
Python package making it easier to work with lots of parameters
jicagile
Lighweight command line tool for agile project management
jicbioimage.segment
Python package designed to make it easy to segment bio images.
jicbioimage
Python package designed to make it easy to work with bio images.
jicgeometry
Basic Python geometry package with no external dependencies.
jicimagelib
Python package designed to make it easy to work with microscopy images.
tinyfasta
Tiny FASTA package, without dependencies, for processing biological sequence files.
