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Username    willsilversmith
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15 projects

connected-components-3d

Last released on

Connected components on 2D and 3D images. Supports multiple labels.

tinybrain

Last released on

Image pyramid generation specialized for connectomics data types and procedures.

dijkstra3d

Last released on

Implementation of Dijkstra's Shortest Path algorithm on 3D images.

cloud-files

Last released on

Fast access to cloud storage and local FS.

task-queue

Last released on

Multithreaded cloud queue client.

cloud-volume

Last released on

A serverless client for reading and writing Neuroglancer Precomputed volumes both locally and on cloud services.

mapbuffer

Last released on

Serializable map of integers to bytes with near zero parsing.

edt

Last released on

Multi-Label Anisotropic Euclidean Distance Transform 3D

fill-voids

Last released on

Fill voids in 3D binary images fast.

fastremap

Last released on

Remap, mask, renumber, and in-place transpose numpy arrays.

kimimaro

Last released on

Skeletonize densely labeled image volumes.

compressed-segmentation

Last released on

Neuroglancer compressed_segmentation codec.

compresso

Last released on

Unofficial packaging of the compresso algorithm based on work by Matejek et al.

zmesh

Last released on

Multilabel marching cubes and simplification of volumetric data.

fpzip

Last released on

Numpy wrapper for fpzip algorithm (P. Lindstrom & M. Isenburg, 2006)

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