11 projects
bigraph-schema
A serializable type schema for compositional systems biology
process-bigraph
None
bigraph-viz
A graphviz-based plotting tool for compositional bigraph schema
vivarium-core
Engine for composing and simulating computational biology models with the Vivarium interface.
stochastic-arrow
bigraphs
a python interface to Robin Milner's bigraph formalism
vivarium-cell
A collection of models for simulating cells with Vivarium.
