24 projects
assorthead
Assorted C++ headers
biocutils
Utilities to use across the biocpy packages.
SpatialFeatureExperiment
Container class for storing data from spatial feature experiments
BiocPy
Interface to all [BiocPy](https://github.com/BiocPy) packages
bioRAT
Bioinformatics random utilities and tools.
biocsetup
"A CLI interface to quickly scaffold new BiocPy Python packages"
SpatialExperiment
Container class for storing data from spatial-omics experiments
SingleCellExperiment
Container class for single-cell experiments
pyBiocFileCache
File based cache for resources and metadata
tiledbarray
TileDb backed objects for array and matrix like data
compressed-lists
Memory-efficient container for list-like objects
IRanges
Python implementation of the [**IRanges**](https://bioconductor.org/packages/IRanges) Bioconductor package.
scrnaseq
Collection of Public Single-Cell RNA-Seq Datasets
BiocFrame
Flexible dataframe representation to support nested structures.
hdf5array
HDF5-backed objects for array and matrix like data
FileBackedArray
File backed objects for array and matrix like data
cpptypes
Automatically creates the C++ and Python-side wrappers for ctypes bindings.
mopsy
Matrix operations for numpy and scipy
rds2py
Parse and construct Python representations for datasets stored in RDS files
BiocGenerics
Generics for core data structures in biocpy
GenomicRanges
Container class to represent and operate over genomic regions and annotations.
MultiAssayExperiment
Container class for representing and managing multi-omics genomic experiments
DelayedArray
Delayed array operations from Bioconductor
SummarizedExperiment
Container to represent data from genomic experiments
