6 projects
lavlab-python-utils
LaViolette Lab utility package
macenko-pca
High-performance Macenko PCA stain deconvolution powered by Rust
lavlab-shell
SHELL Highlights Epithelium and Lumen Locations — whole-slide H&E segmentation
lavlab-taps
Command-line prostate segmentation with the TAPS model
lavlab-cli-utils
LAVLab CLI utilities for pulling large recons and ROI masks from OMERO, moving QuPath GeoJSON annotations in and out of OMERO, and converting between DICOM SEG and NIfTI.
lavlab-pythomics
Feature extraction from histology label maps
