Create HyRes peptide PDB files with specified geometry
Project description
HyresBuilder: A simple package for building HyRes peptide model.
This package is forked from PeptideBuilder and we do some modifications for HyRes.
Thanks for the contribution of PeptideBuilder.
Shanlong Li
Installation:
pip install HyresBuilder
Basic usage:
This package builds HyRes peptide structure from sequence. Please see the examples for details.
To obtain psf file and further run simulation on OpenMM, please follow these instructions.
[!NOTE] After obtaining the pdb files, the initial structures need to be relaxed to get more reasonable state.
Project details
Release history Release notifications | RSS feed
Download files
Download the file for your platform. If you're not sure which to choose, learn more about installing packages.
Source Distribution
Built Distribution
Filter files by name, interpreter, ABI, and platform.
If you're not sure about the file name format, learn more about wheel file names.
Copy a direct link to the current filters
File details
Details for the file HyresBuilder-2.3.3.tar.gz.
File metadata
- Download URL: HyresBuilder-2.3.3.tar.gz
- Upload date:
- Size: 16.9 kB
- Tags: Source
- Uploaded using Trusted Publishing? Yes
- Uploaded via: twine/5.0.0 CPython/3.12.2
File hashes
| Algorithm | Hash digest | |
|---|---|---|
| SHA256 |
e7c54e1fef331ebb679dad859d2be16c8c7502aede7228b1fabe7de54fc010ab
|
|
| MD5 |
4750583fbe4ba9ad7ec087c4b1e85e91
|
|
| BLAKE2b-256 |
d63b1802805472df67199fc4eaff172fda4d8b5441bacb140fb7dd27304dd27f
|
File details
Details for the file HyresBuilder-2.3.3-py3-none-any.whl.
File metadata
- Download URL: HyresBuilder-2.3.3-py3-none-any.whl
- Upload date:
- Size: 15.5 kB
- Tags: Python 3
- Uploaded using Trusted Publishing? Yes
- Uploaded via: twine/5.0.0 CPython/3.12.2
File hashes
| Algorithm | Hash digest | |
|---|---|---|
| SHA256 |
a089bb4c2c869851ab9d1b293fd96b87c505354456e218bc5e08f82c726f66b1
|
|
| MD5 |
fc9ac1f4de0698e5c78b123bad7f4a02
|
|
| BLAKE2b-256 |
ff4d2ffeb042e79496c9c4ae3b2d96551e0dd9be60d56e161e5c99cdd827fefa
|