Skip to main content

Create HyRes peptide PDB files with specified geometry

Project description

HyresBuilder: A simple package for building HyRes peptide model.

This package is forked from PeptideBuilder and we do some modifications for HyRes.
Thanks for the contribution of PeptideBuilder.
Shanlong Li

Installation:

pip install HyresBuilder

Basic usage:

This package builds HyRes peptide structure from sequence. Please see the examples for details.
To obtain psf file and further run simulation on OpenMM, please follow these instructions.

[!NOTE] After obtaining the pdb files, the initial structures need to be relaxed to get more reasonable state.

Project details


Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Source Distribution

HyresBuilder-2.1.0.tar.gz (14.2 kB view details)

Uploaded Source

Built Distribution

HyresBuilder-2.1.0-py3-none-any.whl (12.6 kB view details)

Uploaded Python 3

File details

Details for the file HyresBuilder-2.1.0.tar.gz.

File metadata

  • Download URL: HyresBuilder-2.1.0.tar.gz
  • Upload date:
  • Size: 14.2 kB
  • Tags: Source
  • Uploaded using Trusted Publishing? Yes
  • Uploaded via: twine/4.0.2 CPython/3.11.7

File hashes

Hashes for HyresBuilder-2.1.0.tar.gz
Algorithm Hash digest
SHA256 1d8312705a31753a9a8d6c7e600d935020c536ffff0c02504da4d43b10d44a96
MD5 1f49cb9f3f8169dee7c0be4f627ed7f7
BLAKE2b-256 bdc1fbc7ada54d77181d28f8bf2df3404dfd0db46aff4aea552c4772badf415e

See more details on using hashes here.

File details

Details for the file HyresBuilder-2.1.0-py3-none-any.whl.

File metadata

  • Download URL: HyresBuilder-2.1.0-py3-none-any.whl
  • Upload date:
  • Size: 12.6 kB
  • Tags: Python 3
  • Uploaded using Trusted Publishing? Yes
  • Uploaded via: twine/4.0.2 CPython/3.11.7

File hashes

Hashes for HyresBuilder-2.1.0-py3-none-any.whl
Algorithm Hash digest
SHA256 4111cf3947f321817c4654901830d0488a26d8fa34596f66f56e508e5da7d68a
MD5 4853f69f130bccca1992ce467c510b2d
BLAKE2b-256 0f9451ce7d3077ed95a56c2857bcbd821cdb05b822ecbf8be57412feeb555ed3

See more details on using hashes here.

Supported by

AWS AWS Cloud computing and Security Sponsor Datadog Datadog Monitoring Fastly Fastly CDN Google Google Download Analytics Microsoft Microsoft PSF Sponsor Pingdom Pingdom Monitoring Sentry Sentry Error logging StatusPage StatusPage Status page