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A system for the analysis and exploration of high-throughput adaptive immune receptor sequencing data

Project description

ImmuneDB

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ImmuneDB is a Python module that facilitates efficient storage and analysis of high-throughput B- and T-cell sequence data.

Documentation

Installation and usage instructions can be found at immunedb.com

Support

Basic questions regarding installing and running ImmuneDB can be emailed to aaron.rosenfeld@pennmedicine.upenn.edu. Bugs and feature requests should be submitted as Issues. I try to respond to both within 2 business days if possible.

Citing

If you use ImmuneDB, please cite the tool as:

Rosenfeld, A. M., Meng, W., Luning Prak, E. T., Hershberg, U., ImmuneDB, a Novel Tool for the Analysis, Storage, and Dissemination of Immune Repertoire Sequencing Data. Frontiers in Immunology 9 (2018).

ImmuneDB was originally announced previously in:

Rosenfeld, A. M., Meng, W., Luning Prak, E. T., Hershberg, U., ImmuneDB: a system for the analysis and exploration of high-throughput adaptive immune receptor sequencing data, Bioinformatics 33 (2016), no. 2, 292–293.

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ImmuneDB-0.29.11.tar.gz (76.6 kB view hashes)

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