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Python wrapper for NiftyRec, NiftyReg and NiftySeg: tomographic reconstruction, volumetric registration and segmentation.

Project Description

Registration, segmentation, tomographic reconstruction. Python wrapper of NiftyRec, NiftyReg and NiftySeg.

Typical usage looks like this:

#!/usr/bin/env python from NiftyPy import NiftyRec

… more documentation is required, for now look at how this package is utilized in occiput.io While NiftyPy is just a Python wrapper of the NiftyRec, NiftyReg and NiftySeg libraries, occiput.io provides a high level interface for tomographic reconstruction (SPECT, PET, CT) and for other imaging tasks. It’s easies, with occiput.io, to define the system geometry and reconstruct with iterative algorithms.

Installation

Linux, MacOsX, Win

There are two ways to install under Linux and MacOsX and Windows:

  1. If you have pip installed:

pip install niftypy

  1. download source files, uncompress, at the command line cd to the downloaded folder and run:

python setup.py build test install

Release History

Release History

This version
History Node

0.4.0

History Node

0.3.2

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0.3.1

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0.3.0

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0.2.1

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0.2.0

Download Files

Download Files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

File Name & Checksum SHA256 Checksum Help Version File Type Upload Date
NiftyPy-0.4.0.tar.gz (15.5 kB) Copy SHA256 Checksum SHA256 Source Mar 12, 2017

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