affipred 0.1.2.1

AlphaFold based Functional Impact Prediction of Missense Variations

AFFIPred: AlphaFold based Functional Impact Prediction of Missense Variations

Usage:

First, install the tool using pip.

pip install affipred

Provide input and output files with relative or absolute path:

affipred variants.vcf -o affipred_results.csv

The input should be a .vcf file while the output file name extension should be .csv.

The output file will contain all the features used to predict the impact of the variants alongside the AFFIPred scores and the prediction of functional impact of the variants.