bbo-acm-traingui 0.10.0

GUI to label frames for training of ACM-dlcdetect

ACM-traingui

GUI to label frames for training of ACM-dlcdetect, by Arne Monsees

Installation

1. Install Anaconda
2. Start Anaconda Prompt (Windows) / terminal (linux) and navigate into repository directory
3. Create conda environment conda env create -f https://raw.githubusercontent.com/bbo-lab/ACM-traingui/master/environment.yml

Update

Update with conda env update -f https://raw.githubusercontent.com/bbo-lab/ACM-traingui/master/environment.yml --prune.

Running

1. Start Anaconda Prompt (Windows) / terminal (linux) and navigate into repository directory
2. Switch to environment conda activate bbo_acm-traingui
3. Run with python -m ACM-traingui [options ...]

Options

Assistant mode

Run with python -m ACM-traingui [base data directory]. This starts a GUI in drone mode, for the use by assistants with limited options to influence how the program runs and were it saves. This expects the following file structure:

[base data directory]/data/users/{user1,user2,...}/labeling_gui_cfg.py
[base data directory]/users/

{user1,user2,...} will be presented in a selection dialog on startup. Marking results will be placed in [base data directory]/users/

Master mode

Run with python -m ACM-traingui [configdir] --master. This starts a GUI in master mode. Only do this if you know what you are doing.

Check mode

Run with python -m ACM-traingui [directory of labels.npz] --check [bbo_calibcam calibration npy] . This gives sorted text output of 3d and reprojections errors. Reporjection errors above 5-10px usually indicate errors in labeling and respective frames have to be checked.

Join mode

Run with python -m ACM-traingui [configdir of ACM-dlcdetect] --check [multiple directories containing labels.npz files] . This joins all marked labels in the labels.npz files into the labels.npz file in the dlcdetect configuration. Marked labels overwrite existing labels framewise.

TODO

• Document config
• Document sketch file (2d sketch of animal. If not presented, 3d wireframe is shown instead)
• Document model file