Bioinformatic toolkit with python (It's still under development!)
Project description
bioat
the Bioinformatic Analysis Tools
about author
author: 赵华男 | ZHAO Hua-nan
email: hermanzhaozzzz@gmail.com
Introduction
A python package & command line toolkit for Bioinformatics and data science!
<under development>!!
Installation
# supported platform: Linux / MacOS (intel & arm64) / WSL on Windows
pip install --upgrade bioat
usage
# list commands
bioat list
# check version
bioat version
# check information about bioat
bioat about
# example usage
bioat bam remove_clip --help
samtools view -h test_sorted_n.bam | bioat bam remove_clip | tail
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