library for interacting with `BioCloudCentral.org`_, `CloudMan`_, and `Galaxy`_'s
API. Conceptually, it makes it possible to script and automate the process of
cloud infrastrucutre provisioning and scaling, as well as running of analyses
within Galaxy. In reality, it makes it possible to do things like this:
- Create a CloudMan compute cluster, via an API and directly from your local machine::
from blend.cloudman.launch import CloudManLaunch
cml = CloudManLaunch('<your cloud access key>', '<your cloud secret key')
cml.launch('Blend CloudMan', 'ami-<ID>', 'm1.small', 'password')
cml.get_status()
- Manipulate your CloudMan instance and react to the current needs::
from blend.cloudman import CloudMan
cm = CloudMan("instance IP", "password")
cm.initialize(type="Galaxy")
cm.add_nodes(3)
cluster_status = cm.get_status()
cm.remove_nodes(2)
- Interact with Galaxy via a straighforward API::
from blend.galaxy import GalaxyInstance
gi = GalaxyInstance('<Galaxy IP>', key='your API key')
libs = gi.libraries.get_libraries()
gi.workflows.show_workflow('workflow ID')
gi.workflows.run_workflow('workflow ID', input_dataset_map)
.. note::
Although this library allows you to blend these three services into a cohesive unit,
the library itself can be used with any single service irrespective of the rest. For
example, you can use it to just manipulate CloudMan clusters or to script the
interactions with an instance of Galaxy running on your laptop.
1 maintainer
Metadata
1 maintainer
Release files for blend-lib 0.12
For a detailed explanation of source distributions (sdists) and built distributions (wheels), please see the package formats documentation.
Source distribution (sdist)
| File | Size | Uploaded | Provenance | Actions |
|---|---|---|---|---|
| blend-lib-0.12.tar.gz | 300.3 kB | Without provenance | Details for blend-lib-0.12.tar.gz |
Release files / blend-lib-0.12.tar.gz
| Download URL | blend-lib-0.12.tar.gz |
|---|---|
| Size | 300.3 kB |
| Tags | Source |
|
SHA-256 checksum How to use checksums |
41e4bf110b2c1fd325023cdedda6530120a5c8f738429e6a29efb8c7bf23c5a9
|
|
BLAKE2b-256 checksum How to use checksums |
4ef6942a12d363dcecbeb5fd1659d7dae97425145dca08e01cb2440e38fba9c0
|
| Upload date | |
|
Uploaded using Trusted Publishing? What is trusted publishing? |
No |
Security for blend-lib 0.12
Provenance
Provenance describes where a file came from. On PyPI, provenance is shared via attestations, which provide a verifiable record of the build or publishing details. View details, limitations and caveats.
No provenance found
None of the files in this release were uploaded with provenance metadata.
A note on package security
PyPI is a repository for distributing packages, not a service for auditing them. While third-party security researchers and our staff do their best to detect and remove malicious packages, PyPI cannot guarantee the quality, security or suitability of any given package.
To learn more about protecting yourself from malicious actors, visit our package security documentation.
