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Helper functions for BakingTray and StitchIt

Project description

StitchIt Python Tools

The directory contains Python code for managing BakingTray serial-section 2p data. The main functions of interest are compressRawData.py and transferToServer.py, which are aimed at end users of the microscope. The recipe.py and tools.py modules support these and are aimed at developers.

Install instructions

$ sudo pip install btpytools

Running as sudo allows the installer to add the most important programs to your path, allowing them to be run at the system command line:

  • transferToServer
  • compressRawData
  • summariseAcqs

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