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Project Description

calibcant: tools for thermally calibrating AFM cantilevers

Calculates the spring constant k of a cantilever using the equipartition theorem:

1/2 k_B T = 1/2 K x^2

The analysis uses the expected power spectral density (PSD) of a damped simple harmonic oscillator to filter out noise from the measured PSD.

Installation

Packages

Gentoo

I’ve packaged calibcant for Gentoo. You need layman and my wtk overlay. Install with:

# emerge -av app-portage/layman
# layman --add wtk
# emerge -av sci-physics/calibcant

Dependencies

If you’re installing by hand or packaging calibcant for another distribution, you’ll need the following dependencies:

Package Debian Gentoo
Numpy python-numpy dev-python/numpy
Scipy python-scipy sci-libs/scipy
H5config   dev-python/h5config [1]
H5Py python-h5py dev-python/h5py
Matplotlib python-matplotlib dev-python/matplotlib
Nose python-nose dev-python/nose
FFT_tools   dev-python/FFT-tools [1]
Pypiezo   sci-libs/pypiezo [1]
[1](1, 2, 3) In the wtk overlay.

You’ll also need my pyafm and stepper packages, or suitable replacements.

Installing by hand

Calibcant is available as a Git repository:

$ git clone git://tremily.us/calibcant.git

See the homepage for details. To install the checkout, run the standard:

$ python setup.py install

Usage

See the module docstrings for simple examples.

Testing

Run internal unit tests with:

$ nosetests --with-doctest --doctest-tests calibcant

Licence

This project is distributed under the GNU General Public License Version 3 or greater.

Author

W. Trevor King wking@tremily.us Copyright 2007-2012

Release History

Release History

0.9

This version

History Node

TODO: Figure out how to actually get changelog content.

Changelog content for this version goes here.

Donec et mollis dolor. Praesent et diam eget libero egestas mattis sit amet vitae augue. Nam tincidunt congue enim, ut porta lorem lacinia consectetur. Donec ut libero sed arcu vehicula ultricies a non tortor. Lorem ipsum dolor sit amet, consectetur adipiscing elit.

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0.8

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TODO: Figure out how to actually get changelog content.

Changelog content for this version goes here.

Donec et mollis dolor. Praesent et diam eget libero egestas mattis sit amet vitae augue. Nam tincidunt congue enim, ut porta lorem lacinia consectetur. Donec ut libero sed arcu vehicula ultricies a non tortor. Lorem ipsum dolor sit amet, consectetur adipiscing elit.

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0.7

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TODO: Figure out how to actually get changelog content.

Changelog content for this version goes here.

Donec et mollis dolor. Praesent et diam eget libero egestas mattis sit amet vitae augue. Nam tincidunt congue enim, ut porta lorem lacinia consectetur. Donec ut libero sed arcu vehicula ultricies a non tortor. Lorem ipsum dolor sit amet, consectetur adipiscing elit.

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0.6

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TODO: Figure out how to actually get changelog content.

Changelog content for this version goes here.

Donec et mollis dolor. Praesent et diam eget libero egestas mattis sit amet vitae augue. Nam tincidunt congue enim, ut porta lorem lacinia consectetur. Donec ut libero sed arcu vehicula ultricies a non tortor. Lorem ipsum dolor sit amet, consectetur adipiscing elit.

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0.5

History Node

TODO: Figure out how to actually get changelog content.

Changelog content for this version goes here.

Donec et mollis dolor. Praesent et diam eget libero egestas mattis sit amet vitae augue. Nam tincidunt congue enim, ut porta lorem lacinia consectetur. Donec ut libero sed arcu vehicula ultricies a non tortor. Lorem ipsum dolor sit amet, consectetur adipiscing elit.

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0.4

History Node

TODO: Figure out how to actually get changelog content.

Changelog content for this version goes here.

Donec et mollis dolor. Praesent et diam eget libero egestas mattis sit amet vitae augue. Nam tincidunt congue enim, ut porta lorem lacinia consectetur. Donec ut libero sed arcu vehicula ultricies a non tortor. Lorem ipsum dolor sit amet, consectetur adipiscing elit.

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Download Files

Download Files

TODO: Brief introduction on what you do with files - including link to relevant help section.

File Name & Checksum SHA256 Checksum Help Version File Type Upload Date
calibcant-0.9.tar.gz (40.0 kB) Copy SHA256 Checksum SHA256 Source May 5, 2013

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