cfDNApipe

# cfDNA-Pipeline Cell Free DNA Sequencing Analysis Pipeline

# News version 0.0.1, 2019.06.01 The first test version.

version 0.0.4, 2019.11.24 Add functions to check the reference folder when setting configure.

version 0.0.8, 2020.06.12 Add pipeline analysis function. Include WGS/WGBS paired/single data pipeline and case control comparison analysis pipeline.

version 0.0.9, 2020.06.17 Delete useless folders, remove stepBase2.

version 0.1.0, 2020.06.22 Add pipeline for basic WGS/WGBS and case/control analysis.

version 0.1.1, 2020.06.22 Add qualimap function.

version 0.1.3, 2020.12.01 Archive some functions.

version 0.1.5, 2021.01.05 Pre release.

version 0.1.6, 2021.01.05 Pre release again.

version 0.1.7, 2021.01.11 update report

version 0.1.8, 2021.01.11 fix virus genome error

version 0.1.9, 2021.01.15 test data check

version 1.0.0, 2021.01.16 release

version 1.0.1, 2021.01.16 add nucleosome positioning and tissue of origin function

version 1.0.2, 2021.04.26 update readme and tutorial, fix some bugs

version 1.0.3, 2021.05.07 update readme and tutorial, remove some temp codes

version 1.0.4, 2022.01.18 update arm-level cnv multicore error

Metadata

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Source distribution for cfDNApipe 1.0.4
File	Size	Uploaded
cfDNApipe-1.0.4.tar.gz	520.0 kB	Jan 18, 2022	Details

Download URL	cfDNApipe-1.0.4.tar.gz
Size	520.0 kB
Tags	Source
SHA-256 checksum How to use checksums	`597822e0f40e6b159e59a52524287fcf2508186ea343bac63cd5e2ab8d311813`
BLAKE2b-256 checksum How to use checksums	`419af0c0f72a9f14f55704e15a55eeb8e04d55b38214b14bb32f4a1df12f981d`
Upload date	Jan 18, 2022
Uploaded using Trusted Publishing? What is trusted publishing?	No
Uploaded via	`twine/3.3.0 pkginfo/1.5.0.1 requests/2.24.0 setuptools/49.6.0.post20200814 requests-toolbelt/0.9.1 tqdm/4.48.2 CPython/3.7.3`