circuitree 0.10.2

Genetic circuit design using Monte Carlo tree search

CircuiTree

Genetic circuit design using Monte Carlo tree search

Installation

From a package repository

To install using pip:

pip install circuitree

From the GitHub repository

To install and use circuitree from the GitHub source code, first clone the repo into a directory.

git clone https://github.com/pranav-bhamidipati/circuitree.git[ dir_name]

Then, you can build the environment using the command-line tool poetry. Instructions for installation can be found here.

From the main project directory, run poetry install to install a virtual environment with circuitree installed. The easiest way to use this environment is to run it interactively with poetry shell. Alternatively, you can run a command in the virtual environment with poetry run <command>. For instance, to launch a Jupyter notebook with circuitree pre-loaded, run poetry run jupyter notebook.

Usage

See the quick-start demo.