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A Python package for utilities and classes related to the file I/O, dataset record keeping and visualization for image processing and computer vision.

Project description

Computer Vision Pipeline Tools

cvpl_tools is a Python package for utilities and classes related to the file I/O, dataset record keeping for image processing and computer vision.

Functionalities this repository provides for managing datasets using DatasetReference:

  • DatasetReference keeps an ordered array of image file paths
  • Images are assigned unique IDs used to match with their annotation files
  • DatasetReference can be written to disk as json using strenc.py, recording down the image files used in a processing step and their file paths
  • cvpl_tools/fs.py provides interface to turn image files to and write them from numpy arrays
  • reader_from_cmd.py defines a utility function for creating DatasetReference by pattern matching image files to be included in the dataset
  • cvpl_tools/im folder provides an extensible segmentation pipeline that supports Napari visualization and intermediate result caching/checkpointing functionalities

Dependency

This repository uses Poetry to manage dependency.

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