Library with useful tools for processing genomic data
Project description
Diagho Toolkit
What is Diagho Toolkit ?
Diagho Toolkit is a python library which will read and parse a genomic file and return a generator with a pydantic model.
What database is used ?
- OMIM
- HGNC
- HPO
- gnomAD
- gnomAD constraint
- VCF
- Fasta
- GFF3
What pydantic model is returned ?
- Clinvar
- Feature
- Gene
- GnomAD
- GnomAD_constraint
- Pathology
- Region
- Sequence
- Symptom
- Variant
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