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.. image:: https://zenodo.org/badge/17555/Auerilas/ecopy.svg
:target: https://zenodo.org/badge/latestdoi/17555/Auerilas/ecopy
**EcoPy** provides tools for ecological data analyses. In general, it focuses on multivariate data analysis, which can be useful in any field, but with particular attention to those methods widely used in ecology. `The homepage, with full documentation and examples, can be found here <http://ecopy.readthedocs.io>`_
Install via 'pip install ecopy'
What's New
=======
0.1.2.2
--------
- More Python 3.x compatibility
- Fix typos in code and examples on readthedocs. Thorough code check
License
=====
**EcoPy** is distributed under the MIT license
Version
=====
0.1.2.2
Examples
======
Transforming a site x species matrix, dividing by site totals::
import ecopy as ep
varespec = ep.load_data('varespec')
newMat = ep.transform(varespec, method='total', axis=1)
Calculating Bray-Curtis dissimilarities on the new matrix::
brayMat = ep.distance(newMat, method='bray')
PCA on US Arrests data::
USArrests = ep.load_data('USArrests')
prcomp = ep.pca(USArrests, scale = True)
prcomp.biplot(type = 'distance')
prcomp.biplot(type = 'correlation')
Full online documentation is a work in progress
TO-DO
====
- MINIMUM SPANNING TREE
- PROCRUSTES ROTATION
- LINEAR/SURFACE ENVIRONMENTAL FITTING
- MAXENT WRAPPER
- MANY MANY OTHER THINGS
1 maintainer
Metadata
1 maintainer
Release files for ecopy 0.1.2.2
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