Convenient dowloader of raw files from ENA
Project description
ENA_tool
Convenient dowloader of raw files for ENA.
- Fetches all samples info and metadata from xml files at ENA browser for a project by project id (accession).
- Stores this information to
.csvand.htmlfiles. - Allows to download .fastq files using enaDataGet
The examples of usage this tool and the outputs you can find in examples folder.
To use, please install:
- EnaTool:
pip install ENA_tool - enaDataGet: follow the instructions
Before usage, please, make sure, that enaDataGet is installed properly and that command like enaDataGet -f fastq -a ACCESSION works fine.
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