.. _readme:
.. image:: https://codecov.io/gh/neuropycon/ephypype/branch/master/graph/badge.svg :target: https://codecov.io/gh/neuropycon/ephypype
.. image:: https://circleci.com/gh/neuropycon/ephypype.svg?style=svg :target: https://circleci.com/gh/neuropycon/ephypype
.. image:: https://zenodo.org/badge/92522975.svg :target: https://zenodo.org/badge/latestdoi/92522975
.. image:: https://badge.fury.io/py/ephypype.svg :target: https://badge.fury.io/py/ephypype
README
Description
Neuropycon package of functions for electrophysiology analysis, can be used from graphpype and nipype
Documentation
https://neuropycon.github.io/ephypype
Installation
Requirements
ephypype works with python3
The dependencies (mne, nipype) are automatically installed during ephypype installation (see :ref:ephy_install).
We also recommend to install MNE python by following the installation instructions <http://martinos.org/mne/dev/install_mne_python.html#check-your-installation>_
.. _ephy_install:
Install ephypype
To install ephypype, use the following command:
.. code-block:: bash
$ pip install ephypype
or alternatively, you can download from github the last version and install it:
.. code-block:: bash
$ git clone https://github.com/neuropycon/ephypype.git
$ cd ephypype
$ python setup.py develop
.. comment: .. _conda_install:
Install dependencies with conda
+++++++++++++++++++++++++++++++
.. code-block:: bash
conda install pandas
conda install matplotlib
Software
Freesurfer ++++++++++
- Download Freesurfer software:
https://surfer.nmr.mgh.harvard.edu/fswiki/DownloadAndInstall
- Follow the Installation instructions
https://surfer.nmr.mgh.harvard.edu/fswiki/LinuxInstall
.. comment: MNE +++
1. Download MNE software:
http://martinos.org/mne/dev/install_mne_c.html
Release files for ephypype 0.7
For a detailed explanation of source distributions (sdists) and built distributions (wheels), please see the package formats documentation.
Source distribution (sdist)
| File | Size | Uploaded | Provenance | |
|---|---|---|---|---|
| ephypype-0.7.tar.gz | 1.7 MB | Without provenance | Details |
Built distribution (wheel)
| File | Interpreter | ABI | Platform | Reset |
|---|---|---|---|---|
| ephypype-0.7-py3-none-any.whl | Python 3 | none | any | Details |
Total release size: 1.9 MB
Release files / ephypype-0.7.tar.gz
| Download URL | ephypype-0.7.tar.gz |
|---|---|
| Size | 1.7 MB |
| Tags | Source |
|
SHA-256 checksum How to use checksums |
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|
|
BLAKE2b-256 checksum How to use checksums |
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|
| Upload date | |
|
Uploaded using Trusted Publishing? What is trusted publishing? |
No |
| Uploaded via |
twine/6.1.0 CPython/3.9.21
|
Release files / ephypype-0.7-py3-none-any.whl
| Download URL | ephypype-0.7-py3-none-any.whl |
|---|---|
| Size | 145.1 kB |
| Tags | Python 3 |
|
SHA-256 checksum How to use checksums |
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|
|
BLAKE2b-256 checksum How to use checksums |
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|
| Upload date | |
|
Uploaded using Trusted Publishing? What is trusted publishing? |
No |
| Uploaded via |
twine/6.1.0 CPython/3.9.21
|
Security for ephypype 0.7
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