expipe-plugin-cinpla 0.1.5

Expipe plugins for the CINPLA lab.

Expipe plugin CINPLA

Expipe plugin for CINPLA laboratory

Installation

You can install the package with pip:

>>> pip install expipe-plugin-cinpla

or from sources:

git clone
cd expipe-plugin-cinpla
pip install -e .

Usage

The starting point is a valid expipe project. Refer to the expipe docs to read more on how to create one.

The recommended usage is via Jupyter Notebook / Lab, using the interactive widgets to Register, Process, Curate, and View your actions.

To launch the interactive browser, you can run:

from expipe_plugin_cinpla import display_browser

project_path = "path-to-my-project"

display_browser(project_path)

Updating old projects

The current version uses Neurodata Without Borders as backend instead of Exdir. If you have an existing project created with the old version, you can convert it to a new project as follows:

from expipe_plugin_cinpla import convert_old_project

old_project_path = "path-to-old-project"
new_project_path = "path-to-new-project"

probe_path = "path-to-probe-path.json" # see probes/ folder

convert_old_project(old_project_path, new_project_path, probe_path)

To check out other options, use convert_old_project?