Fast calculation of Edit Distance (ED)
A implementation of edit distance with improved runtime. Implemented using C and cython.
Highlight:
This edit distance calculation is significantly faster than most of existing python package. It enables a max edit distance search, specifically, if you have a query sequence and wanted to find the most similar item in a long list, you could set a maximum edit distance and enable a fast search.
Installation:
Install using pip:
pip install fast-edit-distance
or build from source
git clone https://github.com/youyupei/fast_edit_distance.git
cd fast_edit_distance
python3 setup.py build
python3 setup.py install --user
Usage:
from fast_edit_distance import edit_distance
# example
edit_distance(string1, string2, max_ed=5)
Compare with Levenshtein.distance
The fast_edit_distance.edit_distance has the same function as Levenshtein.distance with significantly improved runtime. Especially when people need to identied pair of strings whose ED are smaller than a number (set max_ed in fast_edit_distance.edit_distance). Here is the runtime test with some random sequence (Run the test/test.py to reproduce this comparison):
Runtime test no max ed cutoff(1_000_000 iteration):
Levenshtein.distance: 46.49s
fast_edit_distance.edit_distance: 12.75s
Runtime test with max ed cutoff 1 (1_000_000 iteration):
Levenshtein.distance: 46.45s
fast_edit_distance.edit_distance: 0.50s
1 maintainer
Metadata
1 maintainer
Release files for fast-edit-distance 1.2.2
For a detailed explanation of source distributions (sdists) and built distributions (wheels), please see the package formats documentation.
Source distribution (sdist)
| File | Size | Uploaded | Provenance | |
|---|---|---|---|---|
| fast_edit_distance-1.2.2.tar.gz | 76.3 kB | Without provenance | Details |
Built distributions (wheels)
Total release size: 4.5 MB
Release files / fast_edit_distance-1.2.2.tar.gz
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| Download URL | fast_edit_distance-1.2.2-pp39-pypy39_pp73-manylinux_2_5_i686.manylinux1_i686.manylinux_2_17_i686.manylinux2014_i686.whl |
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Release files / fast_edit_distance-1.2.2-cp313-cp313-musllinux_1_2_i686.whl
| Download URL | fast_edit_distance-1.2.2-cp313-cp313-musllinux_1_2_i686.whl |
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| Size | 121.0 kB |
| Tags | CPython 3.13 Linux musl 1.2+ x86-32 |
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Release files / fast_edit_distance-1.2.2-cp313-cp313-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl
| Download URL | fast_edit_distance-1.2.2-cp313-cp313-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl |
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| Size | 128.7 kB |
| Tags | CPython 3.13 Linux glibc 2.17+ x86-64 Linux glibc 2.5+ x86-64 |
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Release files / fast_edit_distance-1.2.2-cp313-cp313-manylinux_2_5_i686.manylinux1_i686.manylinux_2_17_i686.manylinux2014_i686.whl
| Download URL | fast_edit_distance-1.2.2-cp313-cp313-manylinux_2_5_i686.manylinux1_i686.manylinux_2_17_i686.manylinux2014_i686.whl |
|---|---|
| Size | 119.0 kB |
| Tags | CPython 3.13 Linux glibc 2.17+ x86-32 Linux glibc 2.5+ x86-32 |
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Release files / fast_edit_distance-1.2.2-cp313-cp313-macosx_11_0_arm64.whl
| Download URL | fast_edit_distance-1.2.2-cp313-cp313-macosx_11_0_arm64.whl |
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| Size | 23.4 kB |
| Tags | CPython 3.13 macOS 11.0+ ARM64 |
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Release files / fast_edit_distance-1.2.2-cp313-cp313-macosx_10_13_x86_64.whl
| Download URL | fast_edit_distance-1.2.2-cp313-cp313-macosx_10_13_x86_64.whl |
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| Size | 24.1 kB |
| Tags | CPython 3.13 macOS 10.13+ x86-64 |
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Release files / fast_edit_distance-1.2.2-cp312-cp312-win_amd64.whl
| Download URL | fast_edit_distance-1.2.2-cp312-cp312-win_amd64.whl |
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| Size | 25.4 kB |
| Tags | CPython 3.12 Windows x86-64 |
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Release files / fast_edit_distance-1.2.2-cp312-cp312-win32.whl
| Download URL | fast_edit_distance-1.2.2-cp312-cp312-win32.whl |
|---|---|
| Size | 23.0 kB |
| Tags | CPython 3.12 Windows x86-32 |
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Release files / fast_edit_distance-1.2.2-cp312-cp312-musllinux_1_2_x86_64.whl
| Download URL | fast_edit_distance-1.2.2-cp312-cp312-musllinux_1_2_x86_64.whl |
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| Size | 135.5 kB |
| Tags | CPython 3.12 Linux musl 1.2+ x86-64 |
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Release files / fast_edit_distance-1.2.2-cp312-cp312-musllinux_1_2_i686.whl
| Download URL | fast_edit_distance-1.2.2-cp312-cp312-musllinux_1_2_i686.whl |
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| Size | 126.8 kB |
| Tags | CPython 3.12 Linux musl 1.2+ x86-32 |
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Release files / fast_edit_distance-1.2.2-cp312-cp312-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl
| Download URL | fast_edit_distance-1.2.2-cp312-cp312-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl |
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| Size | 134.6 kB |
| Tags | CPython 3.12 Linux glibc 2.17+ x86-64 Linux glibc 2.5+ x86-64 |
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Release files / fast_edit_distance-1.2.2-cp312-cp312-manylinux_2_5_i686.manylinux1_i686.manylinux_2_17_i686.manylinux2014_i686.whl
| Download URL | fast_edit_distance-1.2.2-cp312-cp312-manylinux_2_5_i686.manylinux1_i686.manylinux_2_17_i686.manylinux2014_i686.whl |
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| Size | 124.7 kB |
| Tags | CPython 3.12 Linux glibc 2.17+ x86-32 Linux glibc 2.5+ x86-32 |
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Release files / fast_edit_distance-1.2.2-cp312-cp312-macosx_11_0_arm64.whl
| Download URL | fast_edit_distance-1.2.2-cp312-cp312-macosx_11_0_arm64.whl |
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| Size | 24.1 kB |
| Tags | CPython 3.12 macOS 11.0+ ARM64 |
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Release files / fast_edit_distance-1.2.2-cp312-cp312-macosx_10_13_x86_64.whl
| Download URL | fast_edit_distance-1.2.2-cp312-cp312-macosx_10_13_x86_64.whl |
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| Size | 24.9 kB |
| Tags | CPython 3.12 macOS 10.13+ x86-64 |
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Release files / fast_edit_distance-1.2.2-cp311-cp311-win_amd64.whl
| Download URL | fast_edit_distance-1.2.2-cp311-cp311-win_amd64.whl |
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| Size | 25.1 kB |
| Tags | CPython 3.11 Windows x86-64 |
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Release files / fast_edit_distance-1.2.2-cp311-cp311-win32.whl
| Download URL | fast_edit_distance-1.2.2-cp311-cp311-win32.whl |
|---|---|
| Size | 22.8 kB |
| Tags | CPython 3.11 Windows x86-32 |
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Release files / fast_edit_distance-1.2.2-cp311-cp311-musllinux_1_2_x86_64.whl
| Download URL | fast_edit_distance-1.2.2-cp311-cp311-musllinux_1_2_x86_64.whl |
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| Size | 132.4 kB |
| Tags | CPython 3.11 Linux musl 1.2+ x86-64 |
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Release files / fast_edit_distance-1.2.2-cp311-cp311-musllinux_1_2_i686.whl
| Download URL | fast_edit_distance-1.2.2-cp311-cp311-musllinux_1_2_i686.whl |
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| Size | 122.6 kB |
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Release files / fast_edit_distance-1.2.2-cp311-cp311-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl
| Download URL | fast_edit_distance-1.2.2-cp311-cp311-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl |
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| Size | 129.0 kB |
| Tags | CPython 3.11 Linux glibc 2.17+ x86-64 Linux glibc 2.5+ x86-64 |
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Release files / fast_edit_distance-1.2.2-cp311-cp311-manylinux_2_5_i686.manylinux1_i686.manylinux_2_17_i686.manylinux2014_i686.whl
| Download URL | fast_edit_distance-1.2.2-cp311-cp311-manylinux_2_5_i686.manylinux1_i686.manylinux_2_17_i686.manylinux2014_i686.whl |
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| Size | 120.0 kB |
| Tags | CPython 3.11 Linux glibc 2.17+ x86-32 Linux glibc 2.5+ x86-32 |
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Release files / fast_edit_distance-1.2.2-cp311-cp311-macosx_11_0_arm64.whl
| Download URL | fast_edit_distance-1.2.2-cp311-cp311-macosx_11_0_arm64.whl |
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| Size | 24.0 kB |
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Release files / fast_edit_distance-1.2.2-cp311-cp311-macosx_10_9_x86_64.whl
| Download URL | fast_edit_distance-1.2.2-cp311-cp311-macosx_10_9_x86_64.whl |
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| Size | 24.4 kB |
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Release files / fast_edit_distance-1.2.2-cp310-cp310-win_amd64.whl
| Download URL | fast_edit_distance-1.2.2-cp310-cp310-win_amd64.whl |
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| Size | 25.1 kB |
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Release files / fast_edit_distance-1.2.2-cp310-cp310-win32.whl
| Download URL | fast_edit_distance-1.2.2-cp310-cp310-win32.whl |
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| Size | 22.9 kB |
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Release files / fast_edit_distance-1.2.2-cp310-cp310-musllinux_1_2_x86_64.whl
| Download URL | fast_edit_distance-1.2.2-cp310-cp310-musllinux_1_2_x86_64.whl |
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| Size | 117.5 kB |
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Release files / fast_edit_distance-1.2.2-cp310-cp310-musllinux_1_2_i686.whl
| Download URL | fast_edit_distance-1.2.2-cp310-cp310-musllinux_1_2_i686.whl |
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| Size | 114.2 kB |
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Release files / fast_edit_distance-1.2.2-cp310-cp310-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl
| Download URL | fast_edit_distance-1.2.2-cp310-cp310-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl |
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| Size | 117.3 kB |
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twine/5.1.1 CPython/3.12.6
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Release files / fast_edit_distance-1.2.2-cp310-cp310-manylinux_2_5_i686.manylinux1_i686.manylinux_2_17_i686.manylinux2014_i686.whl
| Download URL | fast_edit_distance-1.2.2-cp310-cp310-manylinux_2_5_i686.manylinux1_i686.manylinux_2_17_i686.manylinux2014_i686.whl |
|---|---|
| Size | 109.8 kB |
| Tags | CPython 3.10 Linux glibc 2.17+ x86-32 Linux glibc 2.5+ x86-32 |
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Release files / fast_edit_distance-1.2.2-cp310-cp310-macosx_11_0_arm64.whl
| Download URL | fast_edit_distance-1.2.2-cp310-cp310-macosx_11_0_arm64.whl |
|---|---|
| Size | 24.1 kB |
| Tags | CPython 3.10 macOS 11.0+ ARM64 |
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Release files / fast_edit_distance-1.2.2-cp310-cp310-macosx_10_9_x86_64.whl
| Download URL | fast_edit_distance-1.2.2-cp310-cp310-macosx_10_9_x86_64.whl |
|---|---|
| Size | 24.6 kB |
| Tags | CPython 3.10 macOS 10.9+ x86-64 |
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Release files / fast_edit_distance-1.2.2-cp39-cp39-win_amd64.whl
| Download URL | fast_edit_distance-1.2.2-cp39-cp39-win_amd64.whl |
|---|---|
| Size | 25.1 kB |
| Tags | CPython 3.9 Windows x86-64 |
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twine/5.1.1 CPython/3.12.6
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Release files / fast_edit_distance-1.2.2-cp39-cp39-win32.whl
| Download URL | fast_edit_distance-1.2.2-cp39-cp39-win32.whl |
|---|---|
| Size | 22.9 kB |
| Tags | CPython 3.9 Windows x86-32 |
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SHA-256 checksum How to use checksums |
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twine/5.1.1 CPython/3.12.6
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Release files / fast_edit_distance-1.2.2-cp39-cp39-musllinux_1_2_x86_64.whl
| Download URL | fast_edit_distance-1.2.2-cp39-cp39-musllinux_1_2_x86_64.whl |
|---|---|
| Size | 117.3 kB |
| Tags | CPython 3.9 Linux musl 1.2+ x86-64 |
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Release files / fast_edit_distance-1.2.2-cp39-cp39-musllinux_1_2_i686.whl
| Download URL | fast_edit_distance-1.2.2-cp39-cp39-musllinux_1_2_i686.whl |
|---|---|
| Size | 114.0 kB |
| Tags | CPython 3.9 Linux musl 1.2+ x86-32 |
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SHA-256 checksum How to use checksums |
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twine/5.1.1 CPython/3.12.6
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Release files / fast_edit_distance-1.2.2-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl
| Download URL | fast_edit_distance-1.2.2-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl |
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| Size | 117.1 kB |
| Tags | CPython 3.9 Linux glibc 2.17+ x86-64 Linux glibc 2.5+ x86-64 |
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Release files / fast_edit_distance-1.2.2-cp39-cp39-manylinux_2_5_i686.manylinux1_i686.manylinux_2_17_i686.manylinux2014_i686.whl
| Download URL | fast_edit_distance-1.2.2-cp39-cp39-manylinux_2_5_i686.manylinux1_i686.manylinux_2_17_i686.manylinux2014_i686.whl |
|---|---|
| Size | 109.6 kB |
| Tags | CPython 3.9 Linux glibc 2.17+ x86-32 Linux glibc 2.5+ x86-32 |
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Release files / fast_edit_distance-1.2.2-cp39-cp39-macosx_11_0_arm64.whl
| Download URL | fast_edit_distance-1.2.2-cp39-cp39-macosx_11_0_arm64.whl |
|---|---|
| Size | 24.1 kB |
| Tags | CPython 3.9 macOS 11.0+ ARM64 |
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Release files / fast_edit_distance-1.2.2-cp39-cp39-macosx_10_9_x86_64.whl
| Download URL | fast_edit_distance-1.2.2-cp39-cp39-macosx_10_9_x86_64.whl |
|---|---|
| Size | 24.6 kB |
| Tags | CPython 3.9 macOS 10.9+ x86-64 |
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SHA-256 checksum How to use checksums |
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Release files / fast_edit_distance-1.2.2-cp38-cp38-win_amd64.whl
| Download URL | fast_edit_distance-1.2.2-cp38-cp38-win_amd64.whl |
|---|---|
| Size | 25.1 kB |
| Tags | CPython 3.8 Windows x86-64 |
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SHA-256 checksum How to use checksums |
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twine/5.1.1 CPython/3.12.6
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Release files / fast_edit_distance-1.2.2-cp38-cp38-win32.whl
| Download URL | fast_edit_distance-1.2.2-cp38-cp38-win32.whl |
|---|---|
| Size | 22.9 kB |
| Tags | CPython 3.8 Windows x86-32 |
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SHA-256 checksum How to use checksums |
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twine/5.1.1 CPython/3.12.6
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Release files / fast_edit_distance-1.2.2-cp38-cp38-musllinux_1_2_x86_64.whl
| Download URL | fast_edit_distance-1.2.2-cp38-cp38-musllinux_1_2_x86_64.whl |
|---|---|
| Size | 117.2 kB |
| Tags | CPython 3.8 Linux musl 1.2+ x86-64 |
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SHA-256 checksum How to use checksums |
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twine/5.1.1 CPython/3.12.6
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Release files / fast_edit_distance-1.2.2-cp38-cp38-musllinux_1_2_i686.whl
| Download URL | fast_edit_distance-1.2.2-cp38-cp38-musllinux_1_2_i686.whl |
|---|---|
| Size | 114.4 kB |
| Tags | CPython 3.8 Linux musl 1.2+ x86-32 |
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SHA-256 checksum How to use checksums |
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twine/5.1.1 CPython/3.12.6
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Release files / fast_edit_distance-1.2.2-cp38-cp38-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl
| Download URL | fast_edit_distance-1.2.2-cp38-cp38-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl |
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| Size | 117.8 kB |
| Tags | CPython 3.8 Linux glibc 2.17+ x86-64 Linux glibc 2.5+ x86-64 |
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Release files / fast_edit_distance-1.2.2-cp38-cp38-manylinux_2_5_i686.manylinux1_i686.manylinux_2_17_i686.manylinux2014_i686.whl
| Download URL | fast_edit_distance-1.2.2-cp38-cp38-manylinux_2_5_i686.manylinux1_i686.manylinux_2_17_i686.manylinux2014_i686.whl |
|---|---|
| Size | 110.3 kB |
| Tags | CPython 3.8 Linux glibc 2.17+ x86-32 Linux glibc 2.5+ x86-32 |
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twine/5.1.1 CPython/3.12.6
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Release files / fast_edit_distance-1.2.2-cp38-cp38-macosx_11_0_arm64.whl
| Download URL | fast_edit_distance-1.2.2-cp38-cp38-macosx_11_0_arm64.whl |
|---|---|
| Size | 24.1 kB |
| Tags | CPython 3.8 macOS 11.0+ ARM64 |
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Release files / fast_edit_distance-1.2.2-cp38-cp38-macosx_10_9_x86_64.whl
| Download URL | fast_edit_distance-1.2.2-cp38-cp38-macosx_10_9_x86_64.whl |
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| Size | 24.6 kB |
| Tags | CPython 3.8 macOS 10.9+ x86-64 |
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Release files / fast_edit_distance-1.2.2-cp37-cp37m-win_amd64.whl
| Download URL | fast_edit_distance-1.2.2-cp37-cp37m-win_amd64.whl |
|---|---|
| Size | 25.2 kB |
| Tags | CPython 3.7 CPython 3.7 pymalloc Windows x86-64 |
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Release files / fast_edit_distance-1.2.2-cp37-cp37m-win32.whl
| Download URL | fast_edit_distance-1.2.2-cp37-cp37m-win32.whl |
|---|---|
| Size | 22.5 kB |
| Tags | CPython 3.7 CPython 3.7 pymalloc Windows x86-32 |
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Release files / fast_edit_distance-1.2.2-cp37-cp37m-musllinux_1_2_x86_64.whl
| Download URL | fast_edit_distance-1.2.2-cp37-cp37m-musllinux_1_2_x86_64.whl |
|---|---|
| Size | 109.9 kB |
| Tags | CPython 3.7 CPython 3.7 pymalloc Linux musl 1.2+ x86-64 |
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SHA-256 checksum How to use checksums |
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Release files / fast_edit_distance-1.2.2-cp37-cp37m-musllinux_1_2_i686.whl
| Download URL | fast_edit_distance-1.2.2-cp37-cp37m-musllinux_1_2_i686.whl |
|---|---|
| Size | 106.3 kB |
| Tags | CPython 3.7 CPython 3.7 pymalloc Linux musl 1.2+ x86-32 |
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SHA-256 checksum How to use checksums |
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Release files / fast_edit_distance-1.2.2-cp37-cp37m-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl
| Download URL | fast_edit_distance-1.2.2-cp37-cp37m-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl |
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| Size | 109.3 kB |
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SHA-256 checksum How to use checksums |
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Release files / fast_edit_distance-1.2.2-cp37-cp37m-manylinux_2_5_i686.manylinux1_i686.manylinux_2_17_i686.manylinux2014_i686.whl
| Download URL | fast_edit_distance-1.2.2-cp37-cp37m-manylinux_2_5_i686.manylinux1_i686.manylinux_2_17_i686.manylinux2014_i686.whl |
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| Size | 102.0 kB |
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Release files / fast_edit_distance-1.2.2-cp37-cp37m-macosx_10_9_x86_64.whl
| Download URL | fast_edit_distance-1.2.2-cp37-cp37m-macosx_10_9_x86_64.whl |
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| Size | 24.4 kB |
| Tags | CPython 3.7 CPython 3.7 pymalloc macOS 10.9+ x86-64 |
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Uploaded using Trusted Publishing? What is trusted publishing? |
Yes |
| Uploaded via |
twine/5.1.1 CPython/3.12.6
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Security for fast-edit-distance 1.2.2
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