GOThresher: a program to remove annotation biases from protein function annotation datasets
Project description
GOThresher removes annotation bias from GAF files based on GO term information content, GO evidence, annotation source, number of proteins annotated from a given source, and date. GOThresher accepts one or more GAF files as input. The motivation for GOThresher lies in the observation that protein function annotations are biased due to high throughput experimental studies. Removing such annotation biases can help present a more balanced picture of protein annotations for a given organism or set of proteins.
Release history Release notifications | RSS feed
Download files
Download the file for your platform. If you're not sure which to choose, learn more about installing packages.
Source Distribution
File details
Details for the file gothresher-1.0.29.tar.gz.
File metadata
- Download URL: gothresher-1.0.29.tar.gz
- Upload date:
- Size: 35.7 kB
- Tags: Source
- Uploaded using Trusted Publishing? No
- Uploaded via: twine/3.3.0 pkginfo/1.6.1 requests/2.25.0 setuptools/58.4.0 requests-toolbelt/0.9.1 tqdm/4.55.0 CPython/3.9.0
File hashes
| Algorithm | Hash digest | |
|---|---|---|
| SHA256 |
d9dee6cb7539f4d33aca002c8b5ef2e2ca9cb77c99e800896080742d8c238392
|
|
| MD5 |
62bd6440d0f0d3b1d18d991850b6818d
|
|
| BLAKE2b-256 |
af86acd06002544361d3ba5388652f3ca5f517956258d89495e4fd3a3bd07298
|
