A software tool for efficient filtering of Morpheus search engine results.
groupfilter - a software tool for efficient filtering of Morpheus search engine results
groupfilter is a module based on the pyteomics (http://pythonhosted.org/pyteomics/) package that increases the number of identifications above FDR threshold for Morpheus search engine results.
- pyteomics (>= 3.0)
How to install
- best way to install groupfilter is with pip: pip install numpy pyteomics groupfilter.
- alternatively, you can download source code for each library and run python setup.py install for each of them.
- There may be other ways to install numpy, depending on your platform.
How to use
groupfilter.py file1.tsv [file2.tsv ...] db.fasta
- positional arguments:
files list of Morpheus PSM files
db.fasta path to FASTA file