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imzy: A new reader interface to imzML and other imaging mass spectrometry formats.

Project description

imzy

Build status Python Version Dependencies Status

Code style: black Security: bandit Pre-commit Semantic Versions License Coverage Report

imzy: A simple reader interface to imzML (and maybe in time) other imaging mass spectrometry formats

Very first steps

Initialize your code

  1. Initialize git inside your repo:
cd imzy && git init
  1. Create conda environment. We are using imzy as its name.
conda create -n imzy python=3.9
  1. Initialize and install pre-commit hooks:
make develop
make pre-commit-install
  1. Run the codestyle:
make codestyle
  1. Upload initial code to GitHub:
git add .
git commit -m ":tada: Initial commit"
git branch -M main
git remote add origin https://github.com/imzy/imzy.git
git push -u origin main

🛡 License

License

This project is licensed under the terms of the BSD-3 license. See LICENSE for more details.

📃 Citation

@misc{imzy,
  author = {imzy},
  title = {imzy: A new reader/writer interface to imzML and other imaging mass spectrometry formats.},
  year = {2022},
  publisher = {GitHub},
  journal = {GitHub repository},
  howpublished = {\url{https://github.com/imzy/imzy}}
}

Project details


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imzy-0.1.1.tar.gz (67.7 kB view hashes)

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imzy-0.1.1-py3-none-any.whl (64.1 kB view hashes)

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