kmergenetyper (k-mer gene typer)

Installation

kmergenetyper typer requires kma (>=1.4.0) to be installed and usable directly from path (i.e. $kma). This can be done by installing kma from source or using conda:

conda create -n kmergenetyper -f kmergenetyper.yml

conda activate kmergenetyper

pip install kmergenetyper

Usage

kmergenetyper -h

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