Loci Visualisation Tool.
Project description
Description
LoVis4u is a bioinformatics tool for Loci Visualisation.
Supported input: Genbank, gff3 with sequence
Supported output: Static vector graphics (pdf)
Programming language: Python3
OS: MacOS, Linux
Python dependencies: biopython, bcbio-gff, scipy, configs, argparse, pandas, distinctipy, matplotlib, seaborn, reportlab
Python version: >= 3.8
OS-level dependencies: MMseqs2 (included in the package)
License: WTFPL
Version: 0.0.4 (June 2024)
Detailed documentation with user guide is available at LoVis4u Homepage
Reference 📃
If you find lovis4u useful, please cite:
Artyom. A. Egorov, Gemma C. Atkinson, lovis4u: ---, ---
Contact 📇
Please contact us by e-mail artemdotegorovATmeddotludotse or use Issues to report any technical problems.
You can also use Discussions section for sharing your ideas or feature requests!
Authors 👨🏻💻
LoVis4u is developed by Artyom Egorov at the Atkinson Lab, Department of Experimental Medical Science, Lund University, Sweden 🇸🇪. We are open for suggestions to extend and improve LoVis4u functionality. Please don't hesitate to share your ideas or feature requests.
Release history Release notifications | RSS feed
Download files
Download the file for your platform. If you're not sure which to choose, learn more about installing packages.
