Pipeline for anatomic processing for macaque

Project description

Quick Install

To use it:

pip install macapype

To develop:

git clone https://github.com/Macatools/macapype.git
cd macapype
python setup.py develop

Docker image

docker pull macatools/macapype/latest

Documentation

https://macatools.github.io/macapype/

Related to project:

A guide for PNH MRI processing, and in particular, the session on structural MRI processing

Open Science Room OSR 2020 of OHBM congress presentation of macapype

Forum macapype_users

The macapype_users can be be found here (requires a framateam/framagit account, but should be accessible with a github or bitbucket account)

Project details

Release history Release notifications | RSS feed

This version

0.4.2

Nov 12, 2024

0.4.1

Nov 4, 2024

0.4

Jun 20, 2024

0.4rc1 pre-release

Jun 20, 2024

0.3.5.3

Apr 2, 2024

0.3.5.2

Mar 21, 2024

0.3.5.2rc9 pre-release

Mar 21, 2024

0.3.5.2rc7 pre-release

Mar 21, 2024

0.3.5.1

Feb 22, 2024

0.3.5

Feb 6, 2024

0.3.4.4

Nov 27, 2023

0.3.4.3 yanked

Nov 27, 2023

Reason this release was yanked:

stereo_template is wrong for spm_native

0.3.4.1 yanked

Nov 21, 2023

Reason this release was yanked:

all modifs related to spm_native are in 0.3.4.3

0.3.4 yanked

Nov 16, 2023

Reason this release was yanked:

error nii2mesh and hotfix spm_native

0.3.3

Mar 10, 2023

0.3.2

Sep 21, 2022

0.3.1.1rc14 pre-release yanked

Sep 16, 2022

0.3.1.1rc13 pre-release yanked

Sep 14, 2022

0.3.1.1rc12 pre-release yanked

Sep 6, 2022

0.3.1.1rc11 pre-release yanked

Sep 5, 2022

0.3.1.1rc10 pre-release yanked

Sep 2, 2022

0.3.1.1rc7 pre-release yanked

Aug 3, 2022

0.3.1.1rc6 pre-release yanked

Aug 1, 2022

0.3.1.1rc5 pre-release yanked

Jul 29, 2022

0.3.1.1rc4 pre-release yanked

Jul 28, 2022

0.3.1.1rc3 pre-release yanked

Jul 28, 2022

Reason this release was yanked:

no niftireg in dockerhub

0.3.1.1rc2 pre-release yanked

Jul 27, 2022

Reason this release was yanked:

not the proper version

0.3.1.1rc1 pre-release yanked

Jul 13, 2022

Reason this release was yanked:

pb github actions

0.3.1

May 14, 2022

0.3.0.2.2 yanked

May 13, 2022

0.3.0.2.1 yanked

May 13, 2022

Reason this release was yanked:

was not passing the build_on_release of gitub

0.3.0.2 yanked

May 11, 2022

Reason this release was yanked:

repush

0.3.0.2.dev3 pre-release yanked

Apr 22, 2022

Reason this release was yanked:

was supposed to be on testpypi

0.3.0.1

Dec 4, 2021

0.3.0 yanked

Dec 4, 2021

Reason this release was yanked:

build_on_release -deriv failed with ANTS_prep

0.3.dev3 pre-release yanked

Nov 18, 2021

0.3.dev2 pre-release yanked

Nov 10, 2021

0.3.dev0 pre-release yanked

Nov 8, 2021

0.2.3.2

Sep 30, 2021

0.2.3.1

Sep 15, 2021

0.2.3 yanked

Sep 15, 2021

Reason this release was yanked:

json in workflows are not packaged

0.2.2.13 yanked

Jul 21, 2021

Reason this release was yanked:

Error with ants t1 template

0.2.2.13b1 pre-release yanked

Sep 13, 2021

0.2.2.13b0 pre-release yanked

Sep 13, 2021

Reason this release was yanked:

mistake in version naming

0.2.2.12 yanked

Jul 21, 2021

Reason this release was yanked:

extract_T1_pipe bug for params

0.2.2.11 yanked

Jul 21, 2021

Reason this release was yanked:

all derivatives

0.2.2.10 yanked

Jul 20, 2021

Reason this release was yanked:

derivatives output

0.2.2.9 yanked

Jul 16, 2021

Reason this release was yanked:

NMT_subjet_align not in params

0.2.2.8 yanked

Jun 28, 2021

0.2.2.7 yanked

Jun 16, 2021

0.2.2.6

Jun 14, 2021

0.2.2.5 yanked

Jun 11, 2021

Reason this release was yanked:

issue with NMT_subject_align script

0.2.2.4 yanked

Jun 9, 2021

Reason this release was yanked:

Missing all script in nodes/bash

0.2.2.3 yanked

Jun 2, 2021

Reason this release was yanked:

Missing json (in utils)

0.2.2.2

Jun 2, 2021

0.2.2.1

Feb 23, 2021

0.2.2 yanked

Feb 15, 2021

Reason this release was yanked:

bug <<<

0.2.1 yanked

Feb 3, 2021

Reason this release was yanked:

some bugs

0.2 yanked

Jan 22, 2021

Reason this release was yanked:

some bugs

0.1.1

May 11, 2020

0.1 yanked

May 7, 2020

Reason this release was yanked:

some bugs

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