A Python Package for Biology from Wenzhi Mao
Project description
# mbio
----
## What is **`mbio`**?
This is a biology python package I used in my working. I will translate some algorithms from other language into python. I will try to make the program fast and easy to use. I mainly working on protein sequence analysis.
Now we have v1.1.2, welcome to download and tell me your feeling.
The package is dependent on numpy and prody.
Now, I have
* MI
* MIp
* OMES
* SCA
* DI
* PSICOV
* DICOV
* APC
* BND
* PPV (for PSICOV)
* Sequence shuffle
We also have some functions for different file formats.
* PDB (which could support the .tar.gz bundle PDB parser and writer.)
* Fasta
* Numpy Matrix
* MRC (support .mrc.gz parser and writer.)
----
## Usage
I probably will post some examples in the furture.
----
## Work together
If you are interested in developing, please e-mail me and I will be happy to work together with you.
If you think some algorithms should be added into this package, you could also e-mail me.
----
## Thanks
* [wzmao](https://github.com/wzmao) (Only me now)
----
## License
See the [LICENSE](LICENSE.rst) file for license rights and limitations (MIT).
----
## What is **`mbio`**?
This is a biology python package I used in my working. I will translate some algorithms from other language into python. I will try to make the program fast and easy to use. I mainly working on protein sequence analysis.
Now we have v1.1.2, welcome to download and tell me your feeling.
The package is dependent on numpy and prody.
Now, I have
* MI
* MIp
* OMES
* SCA
* DI
* PSICOV
* DICOV
* APC
* BND
* PPV (for PSICOV)
* Sequence shuffle
We also have some functions for different file formats.
* PDB (which could support the .tar.gz bundle PDB parser and writer.)
* Fasta
* Numpy Matrix
* MRC (support .mrc.gz parser and writer.)
----
## Usage
I probably will post some examples in the furture.
----
## Work together
If you are interested in developing, please e-mail me and I will be happy to work together with you.
If you think some algorithms should be added into this package, you could also e-mail me.
----
## Thanks
* [wzmao](https://github.com/wzmao) (Only me now)
----
## License
See the [LICENSE](LICENSE.rst) file for license rights and limitations (MIT).
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