MicroscPSF-Py
This is a Python implementation of the fast microscope PSF generation tool (using the Gibson-Lanni model). Technical details can be found here.
Install
PyPI
$ python -m pip install MicroscPSF-Py
Source
$ git clone https://github.com/MicroscPSF/MicroscPSF-Py.git
$ cd MicroscPSF-Py
$ python setup.py install
Usage
Please see the examples.ipynb Jupyter notebook.
Acknowledgements
-
Original algorithm Li, J., Xue, F., & Blu, T. (2017). Fast and accurate three-dimensional point spread function computation for fluorescence microscopy. JOSA A, 34(6), 1029-1034. link.
-
Python implementation by Kyle Douglass and Hazen Babcock.
1 maintainer
Metadata
1 maintainer
Release files for MicroscPSF-Py 0.2
For a detailed explanation of source distributions (sdists) and built distributions (wheels), please see the package formats documentation.
Source distribution (sdist)
| File | Size | Uploaded | |
|---|---|---|---|
| MicroscPSF-Py-0.2.tar.gz | 7.0 kB | Details |
Built distribution (wheel)
| File | Interpreter | ABI | Platform | Reset |
|---|---|---|---|---|
| MicroscPSF_Py-0.2-py2.py3-none-any.whl | Python 2, Python 3 | none | any | Details |
Total release size: 14.9 kB
Release files / MicroscPSF-Py-0.2.tar.gz
| Download URL | MicroscPSF-Py-0.2.tar.gz |
|---|---|
| Size | 7.0 kB |
| Tags | Source |
|
SHA-256 checksum How to use checksums |
c6831577d1224da1481ef91434e8323fd4cc594cf45fe83b81aecd4021b00604
|
|
BLAKE2b-256 checksum How to use checksums |
f85cbac6befc7fb0cd1eeb5cccc74e3379070d842fd262088bfdb8e498034d04
|
| Upload date | |
|
Uploaded using Trusted Publishing? What is trusted publishing? |
No |
| Uploaded via |
twine/3.2.0 pkginfo/1.5.0.1 requests/2.22.0 setuptools/50.3.0 requests-toolbelt/0.9.1 tqdm/4.50.0 CPython/3.6.5
|
Release files / MicroscPSF_Py-0.2-py2.py3-none-any.whl
| Download URL | MicroscPSF_Py-0.2-py2.py3-none-any.whl |
|---|---|
| Size | 8.0 kB |
| Tags | Python 2 Python 3 |
|
SHA-256 checksum How to use checksums |
83398871d027112c5be2c55a5cceeb67387d6eddd35ea1b558be927d1cae4290
|
|
BLAKE2b-256 checksum How to use checksums |
22fd43700f28d84e909091a14595cbcb272d517de25de4d9c61ea537282ac2ac
|
| Upload date | |
|
Uploaded using Trusted Publishing? What is trusted publishing? |
No |
| Uploaded via |
twine/3.2.0 pkginfo/1.5.0.1 requests/2.22.0 setuptools/50.3.0 requests-toolbelt/0.9.1 tqdm/4.50.0 CPython/3.6.5
|
