netclop 1.0.0

Network clustering operations for geophysical fluid transport

Network clustering operations

Network clustering operations (netclop) is a command line interface for geophysical fluid transport network construction and associated clustering operations (e.g., community detection, significance clustering).

Installation

Use pipx to install and run in an isolated environment.

brew install pipx
pipx ensurepath

To install:

pipx install netclop

To upgrade:

pipx upgrade netclop

Use

Particle trajectories must be decomposed into initial and final latitude and longitude coordinates and stored in a positions file in the form initial_latitude,initial_longitude,final_latitude,final_longitude. Positions are binned with H3. Community detection uses Infomap.

netclop [GLOBAL OPTIONS] COMMAND [ARGS] [OPTIONS]

Run netclop --help to see all available global options and commands and netclop COMMAND --help for the arguments and options of a command.