Network clustering operations for geophysical fluid transport
Project description
netclop
NETwork CLustering OPerations for geophysical fluid transport.
netclop
is a command-line interface for constructing network models of geophysical fluid transport and performing associated clustering operations (e.g., community detection and significance clustering).
Features
- Binning of Lagrangian particle simulations using H3
- Network construction of fluid transport
- Community detection using Infomap
- Network resampling and significance clustering
- Node centrality calculation
- Spatially-embedded network visualization
About
netclop
was created to facilitate network-theoretic analysis of marine connectivity in support of larval ecology.
Developed at the Department of Engineering Mathematics and Internetworking, Dalhousie University by Karsten N. Economou.
Usage
Particle trajectories should be decomposed into initial and final positions in .csv
form and specified with --input-data lpt
initial_latitude,initial_longitude,final_latitude,final_longitude
Networks are given in the form of a weighted edgelist .csv
with --input-data net
source_node,target_node,weight
Project details
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