NucleoFind: A Deep-Learning Network for Interpreting Nucleic Acid Electron Density
Project description
Install Models with:
nucleofind-install -m phos -o site_packages
Example Usage:
nucleofind -i PDB.mtz -o PDB.map -intensity FWT -phase PHWT
usage: nucleofind [-h] [-m M] -i I -o O [-r [R]] [-intensity [INTENSITY]] [-phase [PHASE]]
options:
-h, --help show this help message and exit
-m M, -model_path M Path to model
-i I, -input I Input mtz path
-o O, -output O Output map path
-r [R], -resolution [R] Resolution cutoff to apply to mtz
-intensity [INTENSITY] Name of intensity column in MTZ
-phase [PHASE] Name of phase column in MTZ
usage: nucleofind-install [-h] -m {phos,sugar,base} [-o {site_packages,ccp4}] [--all] [--reinstall]
nucleofind Install
options:
-h, --help show this help message and exit
-m {phos,sugar,base}, --model {phos,sugar,base}
-o {site_packages,ccp4}, --output {site_packages,ccp4}
--all
--reinstall
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