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A modular approach for preprocessing and deep learning on histopathology images.

Project description

Welcome to PathFlowAI 👋

Version Documentation

A Convenient High-Throughput Workflow for Preprocessing, Deep Learning Analytics and Interpretation in Digital Pathology

🏠 Homepage

NOTE: MedRxiv manuscript and set-up wiki will be posted on this repository shortly! Stay tuned!

Install

First, install openslide.

pip install pathflowai

Usage

pathflowai-preprocess -h
pathflowai-train_model -h
pathflowai-monitor -h
pathflowai-visualize -h

See Wiki for more information on setting up and running the workflow.

Author

👤 Joshua Levy

🤝 Contributing

Contributions, issues and feature requests are welcome!
Feel free to check issues page.

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pathflowai-0.1.1.tar.gz (53.5 kB view hashes)

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