A tool to predict programmed ribosomal frameshifts
Project description
prfect
python3 prfect.py test/phiX174.gbk
and the output are the various heptamer slippery sequences followed by the mfe
3123 3224 gaaaaa -11.2
3123 3224 aaaaat -10.8
3123 3224 aaaatt -9.9
3123 3224 ggaaaa -8.6
3199 3309 ggaaaa -8.6
3199 3309 aaaatt -11.3
3199 3309 caaaaa -16.8
3199 3309 aaaaac -17.2
3890 3936 caaaaa -15.7
3890 3936 aaaaat -15.3
3890 3936 aaaatt -15.3
Project details
Release history Release notifications | RSS feed
Download files
Download the file for your platform. If you're not sure which to choose, learn more about installing packages.
Source Distribution
prfect-0.1.tar.gz
(18.7 kB
view hashes)
Built Distribution
prfect-0.1-py3-none-any.whl
(19.2 kB
view hashes)