pubmed-bibtex

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Python Script & Module to Generate BibTeX Entries for PubMed Publications

Utilizes the API of TeXMed, a BibTeX interface for PubMed.

TeXMed was written by Arne Muller https://www.bioinformatics.org/texmed/

Install

pip3 install --user pubmed-bibtex

Usage

$ pubmed-bibtex 31025164
@Article{pmid31025164,
   Author="...",
   Title="...",
   Journal="...",
   ...
}

from pubmed_bibtex import bibtex_entry_from_pmid
print(bibtex_entry_from_pmid(123456789))

Tests

pip3 install --user pipenv
git clone https://github.com/fphammerle/pubmed-bibtex.git
cd pubmed-bibtex
pipenv run pylint freesurfer_surface
pipenv run pytest --cov=freesurfer_surface

Release files for pubmed-bibtex 1.0.0

For a detailed explanation of source distributions (sdists) and built distributions (wheels), please see the package formats documentation.

Source distribution (sdist)

Source distribution for pubmed-bibtex 1.0.0
File	Size	Uploaded
pubmed-bibtex-1.0.0.tar.gz	30.9 kB	Jan 23, 2022	Details

Built distribution (wheel)

Table of built distributions (wheels) for pubmed-bibtex 1.0.0
File	Interpreter	ABI	Platform	Reset
pubmed_bibtex-1.0.0-py3-none-any.whl 16.8 kB Jan 23, 2022	Python 3	none	any	Details

Total release size: 47.7 kB

Release files / pubmed-bibtex-1.0.0.tar.gz

Download URL	pubmed-bibtex-1.0.0.tar.gz
Size	30.9 kB
Tags	Source
SHA-256 checksum How to use checksums	`0cc4d45a444ab17f1913b052e367fce0b09e4da3e19d9f9e63065c2b8623238f`
BLAKE2b-256 checksum How to use checksums	`b33f3fd3821e5b77a21ea751a935c0bd69aa6afe8de2661b47bbd51b11773130`
Upload date	Jan 23, 2022
Uploaded using Trusted Publishing? What is trusted publishing?	No
Uploaded via	`twine/3.3.0 pkginfo/1.4.2 requests/2.25.1 setuptools/52.0.0 requests-toolbelt/0.9.1 tqdm/4.57.0 CPython/3.9.5`

Release files / pubmed_bibtex-1.0.0-py3-none-any.whl

Download URL	pubmed_bibtex-1.0.0-py3-none-any.whl
Size	16.8 kB
Tags	Python 3
SHA-256 checksum How to use checksums	`06c499c4ad0cc093cb74e819424dd6387470cddca507aa342eeefd0154ef68cb`
BLAKE2b-256 checksum How to use checksums	`436ba16f7b3dfa601f82abe7929c517e06b1dda1fe6064f21d1f63a6f901e034`
Upload date	Jan 23, 2022
Uploaded using Trusted Publishing? What is trusted publishing?	No
Uploaded via	`twine/3.3.0 pkginfo/1.4.2 requests/2.25.1 setuptools/52.0.0 requests-toolbelt/0.9.1 tqdm/4.57.0 CPython/3.9.5`