Visualizing the Spatio-Temporal Dynamics of Clonal Evolution
Project description
Project Title LinG3D: Visualizing the Spatio-Temporal Dynamics of Clonal Evolution
Description This code generates the 3D lineage trees of (1) all clones; (2) individual clones; (3) all clones , but with only those cells that survived to the end of simulation; and (4) individual clones containing only those cells that survived to the end of simulation – see the quick guide to LinG3D routines.
The code is generated in Python
Getting started:
It requires the following libraries: Numpy, Scipy, Matplotlib
Authors Anjun Hu Maureiq Ojwang’ Kayode Olumoyin Katarzyna Rejniak Katarzyna.Rejniak@moffitt.org
Version History 0.1 Initial release
License This project is licensed under the GNU General Public License v3.0
Acknowledgements This work was supported by the NIH/NCI grants CA259387 and CA272601, and the NIH/NCI Physical Sciences Oncology Network (PSON) grant CA202229.
Download files
Download the file for your platform. If you're not sure which to choose, learn more about installing packages.
Source Distribution
Built Distribution
File details
Details for the file pyLinG3D-0.2.tar.gz.
File metadata
- Download URL: pyLinG3D-0.2.tar.gz
- Upload date:
- Size: 7.6 kB
- Tags: Source
- Uploaded using Trusted Publishing? No
- Uploaded via: twine/4.0.2 CPython/3.8.16
File hashes
| Algorithm | Hash digest | |
|---|---|---|
| SHA256 | a7fef391fa0006f78ef704668fcfe7374d2e500553d9a3605bbc3b832bc40a51 |
|
| MD5 | 5bb8d4a6c2ae98201c88d2f371dd0494 |
|
| BLAKE2b-256 | 8a9b5b0bde1213f5820d3546be7fed2477bee90e05ec4f1595f7bb1c7a5aca54 |
File details
Details for the file pyLinG3D-0.2-py3-none-any.whl.
File metadata
- Download URL: pyLinG3D-0.2-py3-none-any.whl
- Upload date:
- Size: 13.6 kB
- Tags: Python 3
- Uploaded using Trusted Publishing? No
- Uploaded via: twine/4.0.2 CPython/3.8.16
File hashes
| Algorithm | Hash digest | |
|---|---|---|
| SHA256 | c7bde3420883132e8dc8a32be2ffdcebec9465ad1807ae2f5c17ce4808188abb |
|
| MD5 | 150627ff602098d95e0cb3fbe462be2e |
|
| BLAKE2b-256 | f2f552f0668cb70799340b454fd4d9bd20c4a401f17d0dcc1145a0f56f5c8140 |
