Utilities for bioimaging and bioimage analysis workflows.
Project description
Bioimage Utilities for Python
pybioimageutils is a Python package designed to provide convenience utilities for bioimaging and bioimage analysis workflows. While foundational libraries like NumPy and scikit-image are built for general purpose use, common tasks — such as overlaying image masks or performing watershed segmentation — often require redundant code copied across multiple projects. This toolbox aims to capture these frequent utility functions in a single, easy-to-include package, streamlining your bioimage analysis pipeline.
Usage
- Install the package using pip
Developers Guide
To test the visualizations, download the BBBC033 dataset from the Broad Bioimage Benchmark Collection. Download both the Images and the
Release history Release notifications | RSS feed
Download files
Download the file for your platform. If you're not sure which to choose, learn more about installing packages.
Source Distribution
Built Distribution
Filter files by name, interpreter, ABI, and platform.
If you're not sure about the file name format, learn more about wheel file names.
Copy a direct link to the current filters
File details
Details for the file pybioimageutils-0.0.1.tar.gz.
File metadata
- Download URL: pybioimageutils-0.0.1.tar.gz
- Upload date:
- Size: 59.9 MB
- Tags: Source
- Uploaded using Trusted Publishing? No
- Uploaded via: twine/6.2.0 CPython/3.14.0
File hashes
| Algorithm | Hash digest | |
|---|---|---|
| SHA256 |
d4dd6055373336d6f8f3b788bcb8a4f7926ab103ed6c75eafddfb1bcf44b8b30
|
|
| MD5 |
e15f70d797b1e8ff8038827fa7f96123
|
|
| BLAKE2b-256 |
1bb84ce285184729293774869b738edca33e8f0f97a11c40c3f9cd7c422156bb
|
File details
Details for the file pybioimageutils-0.0.1-py3-none-any.whl.
File metadata
- Download URL: pybioimageutils-0.0.1-py3-none-any.whl
- Upload date:
- Size: 4.2 kB
- Tags: Python 3
- Uploaded using Trusted Publishing? No
- Uploaded via: twine/6.2.0 CPython/3.14.0
File hashes
| Algorithm | Hash digest | |
|---|---|---|
| SHA256 |
8f45acea9566c7f0a4027a6ad4b0cd0195525438a3f7f3df4ed09f95d8c6dd03
|
|
| MD5 |
2b8fa61f765f8aa217d304f58187b7e6
|
|
| BLAKE2b-256 |
9e412e7768f880316071ff15afd811b62fe3dcc7a68d6ecdec8e100094ebbc47
|
