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Implementation of the Convergent Cross Mapping

Project description

This package computes the Convergent Cross Mapping described by Sugihara et al., 2012: “Detecting Causality in Complex Ecosystems”. Science 338: 496–500

This code was adapted from https://github.com/cjbayesian/rccm by Corey Chivers.

Frederic Laliberte, Univerity of Toronto, 2014

The Natural Sciences and Engineering Research Council of Canada (NSERC/CRSNG) funded FBL during this project.

Version History

0.4: The correlations are computed on the vector at lag 0. Note: this returns to the Sugihara et al. approach.
Bug fixes with E>2

0.3: The correlations are computed on the lagged vectors. Note: this departs from Sugihara et al.

0.2: Added the capability of analyzing time series limited to a few months per year

0.1: First version

Project details


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