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The Glotaran fitting engine.

Project description

pyGloTarAn

pyGloTarAn is a python library for global and target analysis

latest release Conda Version Tests Documentation Status Coverage Status Total alerts

Warning

This project is still in a pre-alpha release stage and should only be used with care.

Additional warning for scientists

The algorithms provided by this package still need to be validated and reviewed, pending the official release it should not be used in scientific publications.

Temporary rename notice (!!!)

This package was previously released on pypi under the name glotaran but was changed so as to not confuse it with the original Glotaran software, first published in the Journal of Statistical Software titeled Glotaran: A Java-Based Graphical User Interface for the R Package TIMP DOI: 10.18637/jss.v049.i03

Installation

Prerequisites:

  • Python 3.6 or higher (Python 2 is not supported)
  • On Windows only 64bit is supported

Note for Windows Users: The easiest way to get python for Windows is via Anaconda

Stable Release

To install pyglotaran from pypi, run this command in your terminal:

$ pip install pyglotaran

If you want to install it via conda, you can run the following command:

$ conda install -c conda-forge pyglotaran

From Source

$ git clone https://github.com/glotaran/pyglotaran.git
$ cd pyglotaran

$ pip install .
# To enforce python3 on systems where python2 is also installed
$ pip3 install .

Note for Anaconda Users: Please make sure to update your distribution prior to install since some packages managed by Anaconda cannot be updated by pip.

Mailinglist

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Credits

The credits can be found in the documentation authors section

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