Skip to main content

Python wrapper for C++ LCMS library OpenMS

Project description

This package contains Python bindings for a large part of the OpenMS library for mass spectrometry based proteomics. It thus provides providing facile access to a feature-rich, open-source algorithm library for mass-spectrometry based proteomics analysis. These Python bindings allow raw access to the data-structures and algorithms implemented in OpenMS, specifically those for file access (mzXML, mzML, TraML, mzIdentML among others), basic signal processing (smoothing, filtering, de-isotoping and peak-picking) and complex data analysis (including label-free, SILAC, iTRAQ and SWATH analysis tools).

You can install pyopenms using:

pip install pyopenms

Please see https://github.com/OpenMS/OpenMS/wiki/pyOpenMS for more information.

Project details


Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Source Distributions

No source distribution files available for this release.See tutorial on generating distribution archives.

Built Distributions

pyopenms_nightly-2.6.0.dev20200406-cp38-cp38-win_amd64.whl (29.2 MB view details)

Uploaded CPython 3.8 Windows x86-64

pyopenms_nightly-2.6.0.dev20200406-cp38-cp38-macosx_10_9_x86_64.whl (25.1 MB view details)

Uploaded CPython 3.8 macOS 10.9+ x86-64

pyopenms_nightly-2.6.0.dev20200406-cp37-cp37m-win_amd64.whl (29.0 MB view details)

Uploaded CPython 3.7m Windows x86-64

File details

Details for the file pyopenms_nightly-2.6.0.dev20200406-cp38-cp38-win_amd64.whl.

File metadata

  • Download URL: pyopenms_nightly-2.6.0.dev20200406-cp38-cp38-win_amd64.whl
  • Upload date:
  • Size: 29.2 MB
  • Tags: CPython 3.8, Windows x86-64
  • Uploaded using Trusted Publishing? No
  • Uploaded via: twine/3.1.1 pkginfo/1.5.0.1 requests/2.23.0 setuptools/46.1.3 requests-toolbelt/0.9.1 tqdm/4.45.0 CPython/3.7.7

File hashes

Hashes for pyopenms_nightly-2.6.0.dev20200406-cp38-cp38-win_amd64.whl
Algorithm Hash digest
SHA256 3fd0636c163eb37edc7f4c3d30a8864d4a6b3e249a08606baa8c8fd76c4de508
MD5 501e4cb1ca3b650b539126d9f65b61ef
BLAKE2b-256 a95e8807b03086c59b62b4b735e27ddfa71b522cd836bfaa85242823e2b276ca

See more details on using hashes here.

File details

Details for the file pyopenms_nightly-2.6.0.dev20200406-cp38-cp38-manylinux2014_x86_64.whl.

File metadata

File hashes

Hashes for pyopenms_nightly-2.6.0.dev20200406-cp38-cp38-manylinux2014_x86_64.whl
Algorithm Hash digest
SHA256 30d94140596ab56b49245c97e85de211ce6ddb633ebb3c3a1a62c2ff3b0da8c6
MD5 0f7a6c705a8fce468d7e944c6da3db83
BLAKE2b-256 276432a2325fdefc655e16195449692fd86a946bf484d6a606ec1a810d90db2e

See more details on using hashes here.

File details

Details for the file pyopenms_nightly-2.6.0.dev20200406-cp38-cp38-macosx_10_9_x86_64.whl.

File metadata

File hashes

Hashes for pyopenms_nightly-2.6.0.dev20200406-cp38-cp38-macosx_10_9_x86_64.whl
Algorithm Hash digest
SHA256 e8458cc88941f3533164339494d6297406406bc5b94cb12440a1551683470a04
MD5 d1097985835d591969d29b9d0fdcd7b0
BLAKE2b-256 3002190aeb8fb55f2bc5f0a6707f36a251a641a2ae8fa3cdd90eac6559164e0b

See more details on using hashes here.

File details

Details for the file pyopenms_nightly-2.6.0.dev20200406-cp37-cp37m-win_amd64.whl.

File metadata

  • Download URL: pyopenms_nightly-2.6.0.dev20200406-cp37-cp37m-win_amd64.whl
  • Upload date:
  • Size: 29.0 MB
  • Tags: CPython 3.7m, Windows x86-64
  • Uploaded using Trusted Publishing? No
  • Uploaded via: twine/3.1.1 pkginfo/1.5.0.1 requests/2.23.0 setuptools/46.1.3 requests-toolbelt/0.9.1 tqdm/4.45.0 CPython/3.7.7

File hashes

Hashes for pyopenms_nightly-2.6.0.dev20200406-cp37-cp37m-win_amd64.whl
Algorithm Hash digest
SHA256 0d3064e6ca37ab50d5f9c5ecf63f1b081063063b960df473ad5b85dc1bf17843
MD5 302ad547c980cd3ed7c94762070e1376
BLAKE2b-256 858fc92b08035b4751185df25880f6abc68843651f6febb04c225d5de4397a0e

See more details on using hashes here.

File details

Details for the file pyopenms_nightly-2.6.0.dev20200406-cp37-cp37m-manylinux2014_x86_64.whl.

File metadata

File hashes

Hashes for pyopenms_nightly-2.6.0.dev20200406-cp37-cp37m-manylinux2014_x86_64.whl
Algorithm Hash digest
SHA256 3f1ed2e3af1d41164e5546caef47e79dd82da73f7de2975f9c97e5cbd12470f6
MD5 6172b9a228c62d1f4ffe4325651be7ea
BLAKE2b-256 1fd3b9ca7ad06ed79b959ce4ce786d68876f6c201ce7bb61368dda07d685957a

See more details on using hashes here.

File details

Details for the file pyopenms_nightly-2.6.0.dev20200406-cp36-cp36m-manylinux2014_x86_64.whl.

File metadata

File hashes

Hashes for pyopenms_nightly-2.6.0.dev20200406-cp36-cp36m-manylinux2014_x86_64.whl
Algorithm Hash digest
SHA256 3b2d7e0b81b4a948e72818e166ddd26589e7ff8780fa55b438fc3c6eb1b1bb62
MD5 f86736c7bd8cd2d01c20c5c9173eb46f
BLAKE2b-256 d783ce928d1e43a338f9fb72df6ca6fce50c99bf412c759e8b3de7728307352a

See more details on using hashes here.

Supported by

AWS AWS Cloud computing and Security Sponsor Datadog Datadog Monitoring Fastly Fastly CDN Google Google Download Analytics Microsoft Microsoft PSF Sponsor Pingdom Pingdom Monitoring Sentry Sentry Error logging StatusPage StatusPage Status page