Python-GDCM
Unofficial GDCM packages for Python 3 on Linux, Windows and MacOS (both Intel and Apple Silicon).
Grassroots DiCoM is a C++ library for DICOM medical files that can be wrapped for Python using SWIG. It supports datasets encoded using native, JPEG, JPEG 2000, JPEG-LS, RLE and deflated transfer syntaxes. It also comes with Parts 3, 6 & 7 of the DICOM Standard as XML files.
Installation
Using pip
pip install -U python-gdcm
From source
Install dependencies
- Compiler for you platform (GCC, Clang, MSVC)
- CMake
- SWIG
- patchelf will also be needed on Linux
- Git to get the source code
Setup environment
If the cmake or swig executables aren't in $PATH, either add them or create CMAKE_EXE and SWIG_EXE envars:
export CMAKE_EXE="path/to/cmake/executable"
export SWIG_EXE="path/to/swig/executable"
Clone source
git clone --recurse-submodules https://github.com/tfmoraes/python-gdcm
Build and install
# Note the trailing slash!
pip install python-gdcm/
Test installed package
python -c "import gdcm; print(gdcm.GDCM_VERSION)"
If you get a ModuleNotFoundError: No module named '_gdcm.gdcmswig' error then make sure your current working directory doesn't contain a _gdcm folder.
Usage
Reading a DICOM image file
import gdcm
reader = gdcm.ImageReader()
reader.SetFileName("dicom_image_file.dcm")
ret = reader.Read()
if not ret:
print("It was not possible to read your DICOM file")
Other Examples
See here https://github.com/malaterre/GDCM/tree/master/Examples/Python
1 maintainer
Release files for python-gdcm 3.2.6
For a detailed explanation of source distributions (sdists) and built distributions (wheels), please see the package formats documentation.
Source distribution (sdist)
| File | Size | Uploaded | |
|---|---|---|---|
| python_gdcm-3.2.6.tar.gz | 3.4 MB | Details |
Built distributions (wheels)
Total release size: 413.5 MB
Release files / python_gdcm-3.2.6.tar.gz
| Download URL | python_gdcm-3.2.6.tar.gz |
|---|---|
| Size | 3.4 MB |
| Tags | Source |
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twine/6.2.0 CPython/3.14.4
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Release files / python_gdcm-3.2.6-cp314-cp314-win_amd64.whl
| Download URL | python_gdcm-3.2.6-cp314-cp314-win_amd64.whl |
|---|---|
| Size | 34.8 MB |
| Tags | CPython 3.14 Windows x86-64 |
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Release files / python_gdcm-3.2.6-cp314-cp314-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl
| Download URL | python_gdcm-3.2.6-cp314-cp314-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl |
|---|---|
| Size | 13.3 MB |
| Tags | CPython 3.14 Linux glibc 2.27+ x86-64 Linux glibc 2.28+ x86-64 |
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No |
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Release files / python_gdcm-3.2.6-cp314-cp314-manylinux_2_27_aarch64.manylinux_2_28_aarch64.whl
| Download URL | python_gdcm-3.2.6-cp314-cp314-manylinux_2_27_aarch64.manylinux_2_28_aarch64.whl |
|---|---|
| Size | 12.3 MB |
| Tags | CPython 3.14 Linux glibc 2.27+ ARM64 Linux glibc 2.28+ ARM64 |
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Release files / python_gdcm-3.2.6-cp314-cp314-macosx_11_0_arm64.whl
| Download URL | python_gdcm-3.2.6-cp314-cp314-macosx_11_0_arm64.whl |
|---|---|
| Size | 10.7 MB |
| Tags | CPython 3.14 macOS 11.0+ ARM64 |
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Release files / python_gdcm-3.2.6-cp314-cp314-macosx_10_15_x86_64.whl
| Download URL | python_gdcm-3.2.6-cp314-cp314-macosx_10_15_x86_64.whl |
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| Size | 11.4 MB |
| Tags | CPython 3.14 macOS 10.15+ x86-64 |
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Release files / python_gdcm-3.2.6-cp313-cp313-win_amd64.whl
| Download URL | python_gdcm-3.2.6-cp313-cp313-win_amd64.whl |
|---|---|
| Size | 34.2 MB |
| Tags | CPython 3.13 Windows x86-64 |
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Release files / python_gdcm-3.2.6-cp313-cp313-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl
| Download URL | python_gdcm-3.2.6-cp313-cp313-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl |
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| Size | 13.3 MB |
| Tags | CPython 3.13 Linux glibc 2.27+ x86-64 Linux glibc 2.28+ x86-64 |
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Release files / python_gdcm-3.2.6-cp313-cp313-manylinux_2_27_aarch64.manylinux_2_28_aarch64.whl
| Download URL | python_gdcm-3.2.6-cp313-cp313-manylinux_2_27_aarch64.manylinux_2_28_aarch64.whl |
|---|---|
| Size | 12.3 MB |
| Tags | CPython 3.13 Linux glibc 2.27+ ARM64 Linux glibc 2.28+ ARM64 |
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Release files / python_gdcm-3.2.6-cp313-cp313-macosx_11_0_arm64.whl
| Download URL | python_gdcm-3.2.6-cp313-cp313-macosx_11_0_arm64.whl |
|---|---|
| Size | 10.7 MB |
| Tags | CPython 3.13 macOS 11.0+ ARM64 |
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Release files / python_gdcm-3.2.6-cp313-cp313-macosx_10_13_x86_64.whl
| Download URL | python_gdcm-3.2.6-cp313-cp313-macosx_10_13_x86_64.whl |
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| Size | 11.4 MB |
| Tags | CPython 3.13 macOS 10.13+ x86-64 |
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Release files / python_gdcm-3.2.6-cp312-cp312-win_amd64.whl
| Download URL | python_gdcm-3.2.6-cp312-cp312-win_amd64.whl |
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| Size | 34.2 MB |
| Tags | CPython 3.12 Windows x86-64 |
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Release files / python_gdcm-3.2.6-cp312-cp312-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl
| Download URL | python_gdcm-3.2.6-cp312-cp312-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl |
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| Size | 13.3 MB |
| Tags | CPython 3.12 Linux glibc 2.27+ x86-64 Linux glibc 2.28+ x86-64 |
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Release files / python_gdcm-3.2.6-cp312-cp312-manylinux_2_27_aarch64.manylinux_2_28_aarch64.whl
| Download URL | python_gdcm-3.2.6-cp312-cp312-manylinux_2_27_aarch64.manylinux_2_28_aarch64.whl |
|---|---|
| Size | 12.3 MB |
| Tags | CPython 3.12 Linux glibc 2.27+ ARM64 Linux glibc 2.28+ ARM64 |
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Release files / python_gdcm-3.2.6-cp312-cp312-macosx_11_0_arm64.whl
| Download URL | python_gdcm-3.2.6-cp312-cp312-macosx_11_0_arm64.whl |
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| Size | 10.7 MB |
| Tags | CPython 3.12 macOS 11.0+ ARM64 |
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Release files / python_gdcm-3.2.6-cp312-cp312-macosx_10_13_x86_64.whl
| Download URL | python_gdcm-3.2.6-cp312-cp312-macosx_10_13_x86_64.whl |
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| Size | 11.4 MB |
| Tags | CPython 3.12 macOS 10.13+ x86-64 |
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Release files / python_gdcm-3.2.6-cp311-cp311-win_amd64.whl
| Download URL | python_gdcm-3.2.6-cp311-cp311-win_amd64.whl |
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| Size | 34.2 MB |
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| Size | 12.3 MB |
| Tags | CPython 3.11 Linux glibc 2.27+ ARM64 Linux glibc 2.28+ ARM64 |
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| Download URL | python_gdcm-3.2.6-cp311-cp311-macosx_10_9_x86_64.whl |
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| Size | 11.5 MB |
| Tags | CPython 3.11 macOS 10.9+ x86-64 |
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| Download URL | python_gdcm-3.2.6-cp310-cp310-win_amd64.whl |
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| Size | 34.2 MB |
| Tags | CPython 3.10 Windows x86-64 |
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| Download URL | python_gdcm-3.2.6-cp310-cp310-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl |
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| Size | 13.3 MB |
| Tags | CPython 3.10 Linux glibc 2.27+ x86-64 Linux glibc 2.28+ x86-64 |
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| Download URL | python_gdcm-3.2.6-cp310-cp310-manylinux_2_27_aarch64.manylinux_2_28_aarch64.whl |
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| Size | 12.3 MB |
| Tags | CPython 3.10 Linux glibc 2.27+ ARM64 Linux glibc 2.28+ ARM64 |
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| Download URL | python_gdcm-3.2.6-cp310-cp310-macosx_11_0_arm64.whl |
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| Size | 10.7 MB |
| Tags | CPython 3.10 macOS 11.0+ ARM64 |
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twine/6.2.0 CPython/3.14.4
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Release files / python_gdcm-3.2.6-cp310-cp310-macosx_10_9_x86_64.whl
| Download URL | python_gdcm-3.2.6-cp310-cp310-macosx_10_9_x86_64.whl |
|---|---|
| Size | 11.5 MB |
| Tags | CPython 3.10 macOS 10.9+ x86-64 |
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SHA-256 checksum How to use checksums |
36589fdbea8585769a86a248cd7463e71963ce46f281d95441fe8be9062f3009
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BLAKE2b-256 checksum How to use checksums |
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twine/6.2.0 CPython/3.14.4
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