Python Template Matching Engine
Project description
Python Template Matching Engine (PyTME)
A software for template matching on electron microscopy data.
📖 Official Documentation | 🚀 Installation Guide | 📚 API Reference
Installation
There are three ways to get PyTME up and running:
- Install from Source:
pip install git+https://github.com/KosinskiLab/pyTME
- Install from PyPi:
pip install pytme
- Docker Container: Build and use the PyTME container from Docker. This assumes a linux/amd64 platform.
docker build \
-t pytme \
--platform linux/amd64 \
-f docker/Dockerfile \
.
🔗 For more on the Docker container, visit the Docker Hub page.
Publication
The pyTME publication is available on bioRxiv.
@article{Maurer2023.10.23.563472,
author = {Valentin J. Maurer and Marc Siggel and Jan Kosinski},
journal = {bioRxiv},
title = {PyTME (Python Template Matching Engine): A fast, flexible, and multi-purpose template matching library for cryogenic electron microscopy data},
year = {2023}}
Project details
Release history Release notifications | RSS feed
Download files
Download the file for your platform. If you're not sure which to choose, learn more about installing packages.
Source Distribution
pytme-0.1.6.tar.gz
(5.7 MB
view hashes)
Built Distribution
Close
Hashes for pytme-0.1.6-cp311-cp311-macosx_14_0_arm64.whl
Algorithm | Hash digest | |
---|---|---|
SHA256 | 5ba0e04b345c0b2ecfced2630297c5da2ce7294423ec2835f6b37d663cc94449 |
|
MD5 | 54df309964509afa982f00b9129cfe95 |
|
BLAKE2b-256 | 5bbbb24399be802c91c390b38d5c3b2beb5e091252c3a9d2ca5c295b63f33b62 |