QRankGWAS
Software implementing the QRank method described in Song el al. Bioninformatics 2017. It was adapted for use within the UK Biobank using Python. It was designed to be used as a command-line tool. Note, the R QRank version and the python implementation will not yield identical results. The python version uses Iterative Weighted Least Squares to fit the null regression models, while the R version uses the simplex method. Therefore, the two implementations can produce slightly different p-values, but they are highly consistent.
Installation:
pip install QRankGWAS
Following installation, specific details regarding the software can be found by running the following command:
python -m QRankGWAS -h
1 maintainer
Metadata
1 maintainer
Release files for QRankGWAS 0.0.9
For a detailed explanation of source distributions (sdists) and built distributions (wheels), please see the package formats documentation.
Source distribution (sdist)
| File | Size | Uploaded | Provenance | Actions |
|---|---|---|---|---|
| QRankGWAS-0.0.9.tar.gz | 8.2 kB | Without provenance | Details for QRankGWAS-0.0.9.tar.gz |
Built distribution (wheel)
| File | Interpreter | ABI | Platform | Actions Reset |
|---|---|---|---|---|
| QRankGWAS-0.0.9-py3-none-any.whl | Python 3 | none | any | Details for QRankGWAS-0.0.9-py3-none-any.whl |
Total release size: 16.8 kB
Release files / QRankGWAS-0.0.9.tar.gz
| Download URL | QRankGWAS-0.0.9.tar.gz |
|---|---|
| Size | 8.2 kB |
| Tags | Source |
|
SHA-256 checksum How to use checksums |
e4665950576a6b6e981e81d344085284bbe4817468faedd6edf60939d4dd32ee
|
|
BLAKE2b-256 checksum How to use checksums |
41c0c97d7b8ddd2853ba8839b004a8437b71447c7e35e06f0d5199440c5f6838
|
| Upload date | |
|
Uploaded using Trusted Publishing? What is trusted publishing? |
No |
| Uploaded via |
twine/3.2.0 pkginfo/1.7.0 requests/2.25.1 setuptools/52.0.0.post20210125 requests-toolbelt/0.9.1 tqdm/4.56.0 CPython/3.7.7
|
Release files / QRankGWAS-0.0.9-py3-none-any.whl
| Download URL | QRankGWAS-0.0.9-py3-none-any.whl |
|---|---|
| Size | 8.6 kB |
| Tags | Python 3 |
|
SHA-256 checksum How to use checksums |
829c281568c3c0d39dbe31a5429ba35687e8475cd59535b99ae238e65d75bdc8
|
|
BLAKE2b-256 checksum How to use checksums |
705de2e9afb5640003236502f3ab038151c24f8b7ca2efe62c3269da9fe473e0
|
| Upload date | |
|
Uploaded using Trusted Publishing? What is trusted publishing? |
No |
| Uploaded via |
twine/3.2.0 pkginfo/1.7.0 requests/2.25.1 setuptools/52.0.0.post20210125 requests-toolbelt/0.9.1 tqdm/4.56.0 CPython/3.7.7
|
Security for QRankGWAS 0.0.9
Provenance
Provenance describes where a file came from. On PyPI, provenance is shared via attestations, which provide a verifiable record of the build or publishing details. View details, limitations and caveats.
No provenance found
None of the files in this release were uploaded with provenance metadata.
A note on package security
PyPI is a repository for distributing packages, not a service for auditing them. While third-party security researchers and our staff do their best to detect and remove malicious packages, PyPI cannot guarantee the quality, security or suitability of any given package.
To learn more about protecting yourself from malicious actors, visit our package security documentation.
