Read chromatography and mass spectrometry binary files
Project description
Rainbow
a python library for parsing chromatography data
by Eugene Kwan and Evan Shi
Setup
Clone the repository and enter the main directory.
git clone https://github.com/evanyeyeye/rainbow.git
cd rainbow
Create and activate a virtual environment.
virtualenv venv
source venv/bin/activate
Install the required dependencies.
pip install -r requirements.txt
Update your PYTHONPATH by adding this line to your .bash_profile or .bashrc file.
export PYTHONPATH="$PYTHONPATH:(YOUR CURRENT WORKING DIRECTORY)"
Testing
cd test
python test_agilent.py
Docs
cd docs
make html
The docpages are generated under the docs/_build directory.
Project details
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