RNAdvisor is a wrapper tool for the computation of RNA 3D structural quality assessment. It uses docker compose to run the RNAdvisor tool in a containerized environment.

This code is a webserver that allows users to upload RNA structures and get quality scores in return.

Installation

To install the RNAdvisor webserver, please first make sure Docker and docker compose are installed on you system.

Then, you need to clone the Docker images using:

make install_docker_images

or:

source ./installations/install_metrics.sh

Then, you can install the webserver using pip:

pip install rnadvisor2_webserver

Usage

To run the webserver, you can use the following command:

rnadvisor2_webserver

Then, the webserver should be accessible in your browser at http://0.0.0.0:8501/RNAdvisor.